KEGG   Triticum dicoccoides (wild emmer wheat): 119275987
Entry
119275987         CDS       T07278                                 
Name
(RefSeq) suppressor of mec-8 and unc-52 protein homolog 1-like isoform X1
  KO
K13111  WD40 repeat-containing protein SMU1
Organism
tdc  Triticum dicoccoides (wild emmer wheat)
Brite
KEGG Orthology (KO) [BR:tdc00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:tdc03041]
    119275987
Spliceosome [BR:tdc03041]
 Complex B
  Other components
   Complex B specific factors
    119275987
SSDB
Motif
Pfam: WD40 WD40_Prp19 WD40_WDHD1_1st WD40_CDC20-Fz WDR55 EIF3I Beta-prop_EML_2 Beta-prop_TEP1_2nd Beta-prop_CAF1B_HIR1 LisH_TPL WD40_MABP1-WDR62_2nd ANAPC4_WD40 Beta-prop_EML Beta-prop_WDR90_POC16_2nd NBCH_WD40 Beta-prop_WDR75_1st WDR90_beta-prop_4th Beta-prop_TEP1_C Beta-prop_IFT122_1st Beta-prop_DCAF4 Beta-prop_Nup120_160 Beta-prop_RIG_2nd Beta-prop_IFT140_1st Beta-prop_SCAP WD40_MABP1-WDR62_1st Ge1_WD40 Beta-prop_NWD2_C Beta-prop_WDR35_TULP_N Beta-prop_NUP159_NUP214 Beta-prop_EIPR1 Beta-prop_SPT8 Beta-prop_WDR19_1st Beta-prop_Vps41 DUF7165 Beta-prop_HPS5 Beta-prop_VPS8 Beta-prop_WDR75_2nd VPS8_N WD40_RFWD3 Beta-prop_IFT122_2nd Beta-prop_IP5PC_F Beta-prop_LRRK2 7TMR-HDED
Other DBs
NCBI-GeneID: 119275987
NCBI-ProteinID: XP_037412821
LinkDB
Position
3B:complement(323857075..323875818)
AA seq 516 aa
MASSTSTLEIEARDVVKIMLQFCKENSLHQTFQTLQNECQVSLNTVDSMDTFIADINAGR
WDAVLPQVAQLKLPRKKLEDLYEQIVLEMAELRELDTARAILRQTQVMGVMKQEEPERYL
RLEHLLVRTYFDPNEAYQESTKEKRRAQIAQAIASEVSVVPPARLMALITQALKWQQHQG
LLPPGTQFDLFRGTAAMKQDEEEAYPTTLSHQIKFGKKTHPECARFSPDGQYLVSCSVDG
IIEVWDYVSGKLKKDLQYQADESFMMHEDAVLCVDFSRDSEMLASGSQDGKIKVWRIRTG
QCLRRLERSHAKGVTSVTFSRDGTQILSTSFDTTARIHGLKSGKMLKEFRGHDSYVNYAI
FSSDGTRVITASSDCTVKVWDAKTADCLQSFKPPPLRGGDASVNSVHLFPKNSDHIVVCN
KTSSIYIMTLQGQVVKSFSSGKREGGDFVAASVSPKGEWIYCVGEDMNMYCFSHQSGKLE
HLMKVHDKDVIGITHHPHRNLVATYAEDCMMKIWKP
NT seq 1551 nt   +upstreamnt  +downstreamnt
atggcgtcttcgacgtccaccctagagatcgaggctcgcgacgtggtgaagataatgctg
cagttctgcaaggaaaactcgcttcatcagacgttccagaccctgcagaacgaatgccag
gtctcgctcaacacggtggacagcatggataccttcatcgccgacattaatgctgggcgc
tgggatgccgtgctgccgcaggttgcccagctgaagctgccgcgcaagaagcttgaggac
ctctacgagcagattgtgctggagatggcagagctccgtgagctggacacggcccgtgca
atccttcgccagacacaggtgatgggggtcatgaaacaggaggaacccgaacgatacctc
cgactagagcacctccttgtccggacatactttgacccgaatgaggcttaccaagaatct
accaaggaaaagcgacgtgcgcagattgcccaagcaattgcttctgaggtttcagtagtc
ccaccagctcggctaatggcactgattacccaggctttgaaatggcaacagcaccaaggt
ttgttaccccctggcacacagtttgatttgttcagaggaaccgctgcaatgaagcaagac
gaagaagaggcatatcctactactttgtcacatcaaataaagttcgggaagaaaacccac
cctgagtgtgctcgattctcacccgatggccagtaccttgtttcatgctcagtggatgga
atcatcgaagtctgggattatgtcagcggcaagctgaaaaaggatcttcaatatcaagcc
gatgaaagctttatgatgcacgaggatgctgtgctctgtgttgattttagtagagattct
gagatgctggcatctggatcacaggatggaaaaattaaggtttggcgtatacgaactggc
cagtgcttgcgacgcctcgagcgttcacacgcgaaaggtgttacaagtgttacattttca
cgtgatggaactcagatactgagtacctcttttgacactactgcgagaatccatggcctt
aagtctgggaagatgctaaaagaatttcgcggtcacgactcctacgtgaactatgccatc
ttttctagtgatggcacccgtgttatcacagcttccagtgactgtactgttaaggtatgg
gatgcgaaaacagcagactgtttgcaatcattcaagcctcctcctctgaggggaggagat
gcatctgtcaactctgtccatttgtttccaaagaatagtgatcacattgttgtctgcaat
aagacttcgtcaatatacatcatgactttacaaggacaggttgtaaagagtttctcatct
ggtaaacgggaaggaggagattttgttgcagcttcagtttcaccaaaaggagaatggata
tattgtgttggtgaagacatgaatatgtattgctttagtcatcagtccggtaaacttgag
catctaatgaaggtccatgacaaggatgtgattggcattactcaccaccctcacaggaac
ttggttgccacctatgccgaagattgtatgatgaagatatggaagccttaa

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