Triticum dicoccoides (wild emmer wheat): 119276158
Help
Entry
119276158 CDS
T07278
Name
(RefSeq) U3 small nucleolar RNA-associated protein 20-like
KO
K14772
U3 small nucleolar RNA-associated protein 20
Organism
tdc
Triticum dicoccoides (wild emmer wheat)
Brite
KEGG Orthology (KO) [BR:
tdc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
tdc03009
]
119276158
Ribosome biogenesis [BR:
tdc03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
119276158
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UTP20_N
UTP20
UTP20_C
CEP104-like_TOG
Cnd3
Motif
Other DBs
NCBI-GeneID:
119276158
NCBI-ProteinID:
XP_037413047
LinkDB
All DBs
Position
3B:complement(391828249..391846601)
Genome browser
AA seq
2689 aa
AA seq
DB search
MAYAAVKCLNTSSSSNKRFVFKSFSERVGDIVIDVYRSIDKVKAEPLSGSSFFLDALVEW
RELNTAEDFISFYDEMIPLVQTLPQIVLHREKIFSGLLRRVNMAARLSLEPIFMLIAEFA
RDILEEFLPFLGRHASAILALLSDGGDRDPEILEQVFTSWSRIMMYLQKYLVKDVVQILR
ITSPLRFFPKDYVREFMAESVSFLLRNARNDQLTQGLRKALFEAAKKSSPIRIDGVTALL
WHVMRGTYTKLHSRAGNVMEFLLSKSILTTIDNKFPDGSSTTREVITGVIHRLCNEVDQK
ELALIYTCLFKEIKSCIKDDCLGHLKHMIDFLTFALENSKQSDMLDKADVLELVKLLIHK
YVRPGSRTGESSSSEFLGSILDFLLCVLDVPVISCNLSIIYAPVFELTNLSAVAFMKKLF
MKGPQIIKAFGRQILSAMDNILEISPEEVLFILLHLFKKATDGVTPHDIDGSHLDREKKV
YKFCDSNVRLWIKFVDDIVKTGNHSSNLVSVKEAAILWGSVRCYSNVKEAPQDSLAMLNK
FIRSLDLLLEVEEDSISGLLKNTWRSLLGAALLSYHELLLVNVGKKSELSFFLSLAKRHS
TCPQVLSAVAEYLDSLHGATSLGMTEEFDPQNLLNSFCIFGASLSSPNKNVRVLTLRILS
YYAKMDQRLGSDDERPHKRRKAEDSAEETLEPKYTNVVDTLLAVESTPVSVSTSRKIAIF
VSRIQMSLSSNTVHDDYIPLLLHGIIGILYNRFSDLWPPALDCLAVLVSKHKDLVWSQFI
QFIAVYQSKGLTVRNQEKLQAVSHPESIIDCFSLYLATDFDYTPLETIATLLLQALQKIP
DVAESCSRHVVPLFLNFMGYTDGSITSVHSYMSDKCKGKQWKMILKEWLNLLRAMRNARS
LSQSKIIQEILTERVLDESDPDIQAKALDCILNWKDEFLIPYSQNLKNLIGLKTLREELT
TWAVSHDSLSIQKCHRSHVVPLVIRVLTPKVRKLKLLGSRKHTGVSHRKAILRFLLQFDA
KELQLFFSLLLKSLIPGSLQLEMFSCQSGNLLESISDAMGTSSSICLESLTWKRANGFLH
LVEEIFGTFGMTHIGPFLNALLIIVVRLLESCMRNLGNSSDEKDPCKQSNHPDNGCSNDQ
EADNSIDLNECPNEMTVADDTEASASVKQLKDLRSLCIRIVSLALGQYESHDFGEYFWST
FFASVKPLIDCFRQEAGSSEKPSSLFSCFMVMSQSPKLAPLLGTNNLVPAIFSILTVRTA
SESITSYALEFIENLLRLDNDLEQQEDHSVKKILAQHMDVLLNSLHDFVNYRKELHRRSG
RWLGQRELRLFKLLLNYITDPSAAEHVVDLVLPFFSKKDLNSDECLEALHVVRGIIQNLR
HGVCVKIVNALNPLLATVGLEQRLCICDIYDGLSLHESSMSSLARLLQDLNAVSTSELGE
LDYDRRIRAYDTVQPQLFHGMQEEHIGAILSHCVYDMSSDELIFRQSASRALQSFLGFSA
SVMNSDPGGSVETATVKPGDNNSRNICTKGRIQQILERTYLHNMGTAMSKDISVQKEWII
LLREMVYNFDHVPSLNSFRPLCKDDLDDDFFHNIIHLQAGKRSKALSLFRQAMKDTNFSE
DVTMKVFVPLFFNIFFDVKAGKGEHVRDVCLDTLSSVAAKVQWEHYRTILMRCFRELSLK
PDKQKVILRLICAVLDVFHFMKPATDISSNSDGMIGASHSSVTFSSTIISLEKQQYLRKV
VFPQVHKLLGADPEKVNVSINLVALKILKLLPVDYFESQLSSIIHRICNFLKNRLESVRD
EARSALAASLKELGIGYLQFVVKILRAILKRGYELHVLGYTLHFLLSKTVTAEMNGSLDY
CLQDLLSVVESDILGDIAEQKEVEKIASKMKETKKRMSFETLKLIAQSITFRTHSSKLIL
PISAHLRKHLTPKLRTKLEAMLHSIALGVECNPSTETSNLFIFVYGLVEDTIEGNESQRK
KNMESGPGQKNILRMNFLELGESGLQNSYIFTRFALSLLHNRLKSIKLHKEDEQLLSMLD
PFVNLLGKCLSSKYESVLSVTFRCLAMLVKLPLPSLKDNANSIKSVLMEIAQRTGNSNGH
LVTSCLKLLAHLLRGFRISLSDDQLQMLVRFPIFVDLQTNPSPVALSLLKAIVKRKLVSP
EIYDIVVGIGELMVTTQTESIRQQCMQILLQFFLNYPLSGKRLQQHIDFFLTNLSYEHAS
GREAVLQMLHDILTRFPQRIIDDQGQTFFLHLVVALANEQHQKVSSLIVVAIKKLLGRIG
DQGKNSIFEYSLSWYTGEKQNLWSASAQVISLLIGNRSLGIGKHLESILAVAKRIMESSC
TASGGVQLDLTGETDLPFWKEAYCSILMMDNLLEQFPELYFKQNTEAIWMTICKLLIHPH
SKLRIYSSALVSKYFASVEQRKKEKLDVTSSFLVQPSRLFLIATAFLKQLRMELSDTAEN
KKIVHNLAYSICNLHVLVKQTTSSHQFWSSLGSCDHGAFLEGFELLGSRKAKNTFLLCTA
SCTDVDGSGLDSSEELASFFVSSLLKKMGKIAMQMEDTHMKIVFSCFSTISSKLSTEAEF
STYAVHMLAPLYKVAEGFAGKVISDEVKQSAEVTRDKLRDLIGVEKFVEIYNSVRKDLKA
KRESRKQAEKLVAAVDPARHAKRKLRMSAKHREHKKRKITAMKMGRWLR
NT seq
8070 nt
NT seq
+upstream
nt +downstream
nt
atggcgtacgcggcggtgaagtgcctcaacacgtcctcctccagcaacaagcgcttcgtg
ttcaagagcttctcggagcgggtgggggacatagtcatcgatgtgtaccgtagcatcgat
aaggttaaggcggagcccttgagcggttcctcgtttttcctcgacgctctggtcgagtgg
agggagctgaatactgcagaagacttcatttcgttttacgatgagatgataccattggtg
cagacattgccacaaatcgtattgcaccgtgagaaaatattttctgggctgctacgacga
gtaaatatggcggcacgattgtccctcgagccaatattcatgttaattgcagaattcgcc
agggatattctagaggaatttttgccgtttctaggaagacacgctagtgctattttggct
ctccttagtgatgggggtgatcgtgaccctgaaatcctggagcaggtcttcacatcttgg
tcacgcataatgatgtacttgcagaagtatctagtaaaagacgttgttcagattctcagg
atcacatctccgctgagatttttcccaaaggattatgtgagagaatttatggctgaatct
gtttcatttttgctgaggaatgcacgtaacgatcaactaacacaaggtttaaggaaagct
ctgtttgaggctgctaaaaaatcgtcacctatacggatagacggggtgactgcgttgttg
tggcacgtaatgagaggaacttacacaaagcttcactcaagagctggaaatgtcatggag
ttcttgttgagcaagtcaatacttaccactatcgacaataaattcccagatgggtcttct
actactcgtgaggtcataactggtgttatccatagattatgcaacgaagtggatcagaaa
gagttggcgttgatatatacttgcttgtttaaagaaatcaaaagctgcattaaggatgat
tgtttggggcacttgaaacacatgattgattttcttacatttgctctagaaaacagcaag
cagagtgatatgcttgacaaggctgatgttcttgaacttgttaagttgctgatccataag
tatgttaggcctggtagcaggacaggagaatcttcttcatctgagtttcttgggagtatc
ttggactttcttctttgtgttttggatgttccagttatttcttgcaatttatccatcata
tacgcccctgtatttgaactaaccaatttgagcgcggttgcctttatgaaaaagcttttc
atgaaaggcccacaaattataaaagcttttgggaggcagatactgagtgcaatggataat
attcttgagatttcacccgaggaagttctctttatccttctgcatttatttaagaaagca
acagatggagtaactccccatgacattgatggtagtcatcttgatcgggagaagaaagtg
tataagttctgtgattcaaatgtccgtttatggataaagtttgtagatgatatagtcaag
acaggcaatcattcgagtaatctggtcagtgtaaaggaagctgctatactatggggatct
gttcgctgctactcaaatgttaaagaagcccctcaagatagtttagcaatgctgaataag
tttattcgcagccttgatctgttacttgaggtggaagaagatagcattagtggtcttctg
aagaatacctggagaagtctactcggtgcagcattattatcgtaccatgaactactgctg
gttaacgtcggtaaaaaatcagaattaagtttcttcctatctcttgccaagaggcacagc
acatgtccgcaagtactctctgctgtagctgaatatttggattccctacatggagcaact
tccctggggatgacggaagaattcgatccacagaatctcttgaattcattctgtatcttt
ggtgctagcttgagcagtccaaataagaatgtccgggttttgacattgaggattttatct
tattatgcaaagatggatcaacgcctaggctcagatgatgagcggccacataagaggcga
aaagcagaagattctgcagaggaaactcttgaacctaaatacactaatgttgtcgatact
cttctcgctgttgaatcaactccagtttcagtatctactagccgcaaaattgctatcttc
gtttctcggatacaaatgagtctatcttctaatacggttcatgatgattacatacctctt
ctcttgcatgggattattggcatcttatacaatcgatttagtgatctgtggccaccagca
ctggattgtcttgctgtccttgttagcaaacacaaggatcttgtctggagtcagtttatt
cagtttattgcagtttaccagtcaaagggtctaaccgtgagaaaccaagagaagctgcaa
gctgtgtcccacccagaatctattattgactgcttcagcttatatcttgctacggatttt
gattatacaccccttgagacgattgctacactattgcttcaagccctccaaaagatacct
gatgttgctgagtcttgctctcgacatgtcgttccattatttctaaacttcatgggctat
accgatggcagcatcactagtgtccattcatatatgtctgacaagtgtaaaggcaaacaa
tggaaaatgattctaaaagaatggctgaacttgttgcgagcaatgcgcaatgctcgatca
ctgtcccagagcaagattattcaggaaatattaactgaaagggtcctcgatgagagtgat
cctgatatacaggcaaaagcattggattgcattctgaactggaaggatgaattcctaatc
ccatacagtcaaaaccttaagaatctgatcggcttgaaaactctccgtgaagaactcacc
acgtgggcagtttcacatgactctttatctatccagaaatgtcacagaagtcatgttgtt
cctttggttattcgtgtgttaacacctaaagtaagaaaactgaagctgcttggttctcga
aagcacacgggggttagccatcgaaaggccattctccgtttccttctgcagtttgatgca
aaggagcttcagctctttttctcgttactactaaagtccttgatccctgggagccttcaa
cttgaaatgttctcttgtcagtccggcaacctacttgaaagtatttctgatgccatggga
acttcgtccagcatctgtctagagagtcttacatggaaaagggcaaatggttttcttcat
ttagttgaagagatttttggtactttcggcatgacacatataggtccatttcttaatgct
ctattgatcattgttgttcggttgctggagagttgcatgcggaatcttggaaacagcagc
gatgagaaagatccttgtaaacaatcaaatcaccctgataatggttgttccaatgaccag
gaagctgacaattccatagatctgaatgaatgcccaaatgagatgacagtagccgacgat
actgaggcaagtgcctcagtcaagcagttaaaggatcttaggtccttatgtattcgaatc
gtttccttggcactcggtcagtatgaaagtcatgactttggagaatacttctggagtact
ttttttgcttctgtgaaacctctgattgactgcttcagacaagaggctggcagtagtgag
aaaccgagctctttattttcttgcttcatggttatgagtcagagcccaaaattagcacca
ctattagggactaataaccttgtaccggctatattttctattttgactgtgaggactgcg
tcagaatctatcacctcctatgcacttgagtttattgagaatctattgaggctggataat
gatttggagcagcaagaagatcactcggtgaagaaaattcttgctcaacatatggatgtt
cttctcaacagtctccatgattttgttaattatcgcaaagaacttcacaggagatctggg
agatggcttgggcaacgtgaacttaggttgtttaaactattgctaaattacatcacagat
ccttcagctgcagagcatgttgtagatctcgtccttccgttttttagtaagaaggatttg
aactctgatgagtgtctggaagctctacatgttgtaaggggaataatacaaaatctacga
catggtgtgtgtgtaaaaattgtaaatgcactcaatccattgcttgcgactgttggactc
gagcagcggctatgtatctgtgatatttatgatgggctttcattgcatgagtcttcaatg
tcctctctggctcggttactgcaagatctgaatgcggtttcaacctcagaactaggtgaa
ctagattatgacaggagaatcagagcatatgatacggttcagccgcagttatttcacggc
atgcaagaagaacatataggtgccatattatctcactgcgtgtatgatatgtcatccgac
gagctaattttccggcaaagtgcatccagggctcttcaatcattcctgggattctctgca
tcagttatgaacagtgaccccggcggctctgttgaaacagccactgttaaacctggagac
aataattccagaaacatttgcacgaaaggccgtattcaacaaatattagagagaacttac
cttcataatatgggaacagcgatgtctaaagacatatcagttcaaaaggagtggatcatt
ttacttcgggagatggtctataattttgatcatgtaccatccttaaactccttcaggcct
ctctgtaaagacgatctggatgacgattttttccacaacataattcatttacaggctggt
aaaagatccaaagcgttatctcttttcaggcaggcaatgaaagataccaacttttcagag
gacgtgactatgaaagtctttgttccactgtttttcaatatattttttgatgtcaaagct
gggaagggtgaacatgtaagagatgtatgtttggatacactttcttctgttgctgccaaa
gtgcagtgggagcattacagaacaatattgatgagatgcttccgtgagttgagtctcaag
cctgataagcagaaagtcattttgaggctaatatgtgctgtgttagatgtgttccatttc
atgaaacccgcaactgatatctcgagtaattctgatggtatgattggagcttctcattct
tccgttacattctcctcaaccataatctcattggagaagcaacaatacctgcggaaggta
gtatttccacaggtccataagttattaggagccgatccagagaaagtcaatgtaagcata
aacctggtagcactcaaaatactcaagttactaccggtggattattttgagtcacaactt
tcaagcatcatacatcgaatctgcaactttctcaagaatcgtcttgaaagcgtacgtgat
gaagcaaggtcagctttagctgcatcgcttaaggaacttgggattggttacctgcagttt
gtggtcaagatattgagggcgatactgaaaaggggttacgagctacatgttctgggctac
acccttcattttttattatcaaaaactgtgactgctgagatgaatggtagtcttgactat
tgcttacaagatttgttgtctgtagttgagagtgatatacttggagatattgcagagcaa
aaggaagttgaaaagattgcctccaaaatgaaagagacaaagaagagaatgtcatttgag
actcttaagttgattgctcagagtattacattcaggacacattcttcgaaattaatcttg
ccaatttctgcacatcttcggaagcaccttactccaaaattaagaacgaaacttgaggcg
atgttacacagtatagccttgggggttgagtgcaacccatcaactgaaacttcaaactta
tttatatttgtttatggccttgttgaggataccattgaagggaatgaatctcagcgcaaa
aagaatatggaatctggtcctggtcaaaaaaacattctcagaatgaatttcctagaactt
ggcgagagtgggttacaaaattcctatatatttaccaggtttgcactttctttgctgcac
aatcggttgaagagcatcaagctgcacaaggaagatgagcaactattgtctatgttagat
ccttttgtcaaccttctgggaaaatgcctgagttccaagtatgaaagtgtcctttctgtc
acttttagatgtcttgccatgttggtgaaacttcctttgccatctctcaaggacaatgca
aattctatcaagagtgtactaatggagattgctcagagaactggaaattctaatggccat
ttggtcacatcttgtttgaaactacttgctcatttgcttagaggatttaggatttcactt
tcagatgatcaactccagatgcttgtccgtttccctatttttgttgatctccagacaaac
ccatcacctgttgccttgtcgcttctgaaagcaattgtcaaaagaaaattggtttcccct
gagatttatgatattgtagttgggataggagaattgatggttacaactcaaacagagtct
atacgtcagcaatgtatgcaaattctgctacagttttttctaaattacccactctcaggg
aagcgcttacaacagcatattgattttttcctgacaaacctgagttatgagcatgcatca
ggaagagaagcggtgctccaaatgctccacgatattcttaccagattccctcagaggatt
attgatgaccagggtcaaactttttttcttcatctggtagttgccttggcaaatgaacag
caccagaaggtgtcttctttgattgtcgtagcaatcaagaagctgttagggcgcattggt
gatcagggaaagaattctatttttgagtactctctttcctggtacactggtgaaaaacag
aatttgtggagcgcttcagcccaggttattagtctacttattgggaatcgctcattagga
attggtaaacatcttgaaagtattttggctgttgcgaagcgaataatggaatcttcttgc
accgcttctggaggagtacaactagacttaactggggaaactgatctgccattttggaaa
gaggcttactgttctattctaatgatggataacttacttgaacagtttccagagttgtat
ttcaaacaaaatacagaggcgatatggatgacaatttgcaagctgctgatacatccccat
tcgaagttacgcatttattctagcgctctggtatccaagtattttgcttcagtagagcag
aggaaaaaagagaagttggatgtcacatcatcgttccttgtccaaccaagcaggctattc
ctaattgctactgctttcttgaaacagttgaggatggagctaagtgatactgcagaaaat
aagaaaattgtacacaatcttgcatactcaatctgtaacttgcatgtgttggttaagcaa
acaacttcatcgcatcagttttggtctagccttggttcttgtgatcatggtgccttcctc
gagggttttgaattgcttggttcaagaaaagcaaagaacacatttctcctctgcactgcc
tcttgcactgacgtagatggatctggccttgacagcagtgaagaacttgcatctttcttt
gtttcttctctcctgaagaaaatgggaaaaattgcaatgcagatggaggacacacatatg
aagatcgtgttcagttgtttcagtacgatttcatcaaaactaagcactgaagctgaattt
tcaacctatgctgttcacatgttggccccattgtacaaagttgctgaaggatttgctggg
aaagtcatcagtgatgaagttaagcagtcagcagaggtgaccagggacaaactacgtgat
ctcattggtgttgagaaatttgtggaaatttacaacagtgtccggaaggacctgaaagca
aagagggagagcagaaagcaggctgagaagcttgttgcagcggtcgacccagcgcggcac
gccaagaggaagttgcgtatgtctgccaagcaccgagaacacaagaagcggaagataaca
gcgatgaagatgggaaggtggttgaggtag
DBGET
integrated database retrieval system
