Triticum dicoccoides (wild emmer wheat): 119276299
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Entry
119276299 CDS
T07278
Name
(RefSeq) protein SEH1-like
KO
K14299
nucleoporin SEH1
Organism
tdc
Triticum dicoccoides (wild emmer wheat)
Pathway
tdc03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
tdc00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
119276299
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tdc03019
]
119276299
04131 Membrane trafficking [BR:
tdc04131
]
119276299
Messenger RNA biogenesis [BR:
tdc03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
119276299
Membrane trafficking [BR:
tdc04131
]
Autophagy
Other autophagy associated proteins
SEACAT/GATOR2 complex
119276299
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_THOC3
Beta-prop_IFT122_1st
WD40_WDHD1_1st
WD40
WD40_CDC20-Fz
Beta-prop_WDR3_1st
Beta-prop_WDR5
ANAPC4_WD40
WD40_Prp19
Beta-prop_Aladin
Beta-prop_EML_2
Beta-prop_WDR3_2nd
Beta-prop_WDR19_1st
Beta-prop_TEP1_2nd
Beta-prop_CAF1B_HIR1
WD40_Gbeta
Beta-prop_IFT140_1st
Beta-prop_WDR35_TULP_N
EIF3I
DSE1_N
WD40_MABP1-WDR62_2nd
Motif
Other DBs
NCBI-GeneID:
119276299
NCBI-ProteinID:
XP_037413231
LinkDB
All DBs
Position
3B:complement(422997538..423001804)
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AA seq
323 aa
AA seq
DB search
MADQKVAQLGPGAACCGWNHCGRRLAAGAVDGSVSVYDSQPSPSSKWQAHEHAIVAVVWL
PPDYGDAIACVCADGTLSLWEEIAEDDQLPIWRKCKVFEGGSSHILNVQFGLLLSSLKMV
IAYSDGQVKVYELLDSLELDKWQLQAELQNIIDPVSRIGKPACISASIAWSPRRGEGQQA
SFAIGFNSDSPNFNSCKIWEFEEAHQRWLPLIELGSPEDKGERVHALAWAPNIGRPYEMI
AVATCKGIAVWHVGFNPESDGRLSTENVAVLPGHNGEVCQLEWDMGGMTLASTGVDGMVR
LWQANLNGVWHEQAVLDCNGSHQ
NT seq
972 nt
NT seq
+upstream
nt +downstream
nt
atggcggatcagaaggtggctcagttggggcctggagctgcgtgctgcggctggaaccac
tgcggccggcgcctagccgccggcgccgtcgatgggtccgtttccgtctacgattctcag
ccgtctccctcctccaagtggcaggcccatgagcatgccatagtggctgtcgtctggctt
cctccggactacggtgatgctatagcttgtgtctgtgctgacggtacactgtctttgtgg
gaggagattgctgaagatgatcaacttccaatctggagaaaatgtaaagtctttgagggt
ggcagttcccacatcctaaatgtacagtttggtttgctgctgtcaagtctgaaaatggtt
attgcatactcagatggtcaagtgaaagtctatgaacttttggattcgttggaattggac
aagtggcagcttcaggcagagctacagaatattatcgatcctgtttccagaattgggaag
ccagcatgcatttctgcatcaattgcatggagtccaagaagaggtgaaggccagcaggct
agttttgctattggtttcaattcggattctccaaactttaactcttgcaagatttgggag
tttgaagaagctcaccagcgctggcttccacttattgaacttggttcaccggaggataag
ggggagagagtacatgctctagcatgggctcctaacattggcagaccatatgagatgata
gcagttgcaacctgcaaaggtatagcagtgtggcatgtaggcttcaaccctgaatctgac
ggcagactgtcaacagagaatgttgctgtacttcctggccacaatggggaggtatgccaa
ctggaatgggacatgggcggtatgacgctcgcatcgaccggagtggatggcatggttagg
ctatggcaagccaacttaaatggagtttggcatgagcaggctgtgcttgactgcaatggg
tcacaccagtaa
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integrated database retrieval system
