Triticum dicoccoides (wild emmer wheat): 119276489
Help
Entry
119276489 CDS
T07278
Name
(RefSeq) protein VACUOLELESS1-like
KO
K20180
vacuolar protein sorting-associated protein 16
Organism
tdc
Triticum dicoccoides (wild emmer wheat)
Pathway
tdc04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
tdc00001
]
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
119276489
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tdc04131
]
119276489
Membrane trafficking [BR:
tdc04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
119276489
Hops complex
119276489
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vps16_C
Vps16_N
WD40_WDHD1_1st
Motif
Other DBs
NCBI-GeneID:
119276489
NCBI-ProteinID:
XP_037413451
LinkDB
All DBs
Position
3B:454446931..454466579
Genome browser
AA seq
871 aa
AA seq
DB search
MSSSVSVAAEWDLLSDRFYRRITIYSPLPWSSPATTTASSSGGGSSGVSRLDLSTHIVAA
APFGGPIAAVRDDSKIVQLHSEPSRRRLLLFSSSGHPLASSPWTPHLPRLHSLAFSSSLN
LLALLSDGSLLRFRLPDLNPITSSSPVPLLPPASGGVADAVFWGGGVAILTEDNRVVVTT
DIEVDDPHPRELADPGVAEDEQVLCMAVVEPQFVMSGSPEVLLAVGDRVVAVDEDGVQVL
GEALEIGPVQKMAVSPNGKLLAAFAHDGRLFVIPTDFSRIIFEYECDSALPPDQIAWCGL
DSVLLYWSEVLLMVGPNGDPVQYNYDEPVMLIPECDGVRILTNSSMEFLHRVPDSTTLIF
GIGSMSPAALLYDARDHYDKQSAKAYDNYQLISSSLPEAIEACIDAAGYEFDVSRQHTLL
RAATYGLAFCSRFPHGRFQEMCKILRVLNAVRDPEIGMPLTVKQYRLLTATVLIGRLINA
NQHLLALRISEYLNLNPEVVIMHWACEKITASAAIPDVVLLEGLLDKLRLCKGISYAAVA
AHADKSGRRKLAAMLVDHESQSSKQIPLLLSIDEQDKALQKSIESGDTDLVYLVLFHIWQ
KISVEKSAPLDFFGVINARPLARDLFIAYARHSKHEALKDFFLSTGRLQDAGFLLLKESR
ELERNPMASKGSPLHGPQVRLVEQAHRLFAETKEHLFESKSAEEHAKLLRVQHQLEVSTK
QAIFVGSSVSDTIKTCIVMGNERAAVKVKSEFKVPDKRWYWLKSCALATVGNWDALETFS
REKRPPGGYKPFVEACIDAGQKTEALKYIPKLTDPGERSEAYARLNMTEEAKKAASEANN
GDELFGRLKSTLAQNTLIDTLRDRLSFQGTY
NT seq
2616 nt
NT seq
+upstream
nt +downstream
nt
atgtcctcctccgtctccgtcgcggcggagtgggacctcctctccgaccgtttctaccgc
cgcatcaccatctactcccccctcccctggtcctccccggccaccaccaccgcctcctcc
tccggcggcggcagctccggggtcagccgcctcgacctctcgacccacatcgtcgccgcc
gctcccttcggcggcccgattgccgccgtccgcgacgactccaagatcgtgcagctccac
tccgagccctcgcgccgtcgcctcctcctcttctcctcatccggccacccactcgcctcc
tccccttggacgccccacctcccccgcctccactcgctcgccttttccagctccctcaac
ctcctcgccctcctctccgatggttccctcctccgtttccgcctccccgatctgaatccc
attactagctccagccccgtgcccctgctgccgcctgcctcaggcggcgtcgccgacgct
gttttctggggaggcggcgtggctatcctcaccgaggacaaccgcgtcgtggtcaccacc
gacatcgaagtcgacgacccgcacccgcgggagctcgccgacccgggcgttgccgaggac
gagcaggtgctgtgtatggccgtggtggagccacagttcgtcatgtccgggagtccagag
gttctgcttgcagttggcgatcgggtagtggcagttgacgaggatggcgtgcaggtgctc
ggagaggccctggagattggacccgtgcagaaaatggcggtgtcaccaaacggaaagctg
cttgcagcgtttgcacatgatgggcgcttgttcgtaatccccacggatttttccaggatc
atattcgagtatgagtgtgattctgcattaccaccggatcaaattgcttggtgtgggttg
gacagtgtgctcctttactggtctgaagtgcttttgatggttggacccaatggagatcca
gtgcagtacaattatgatgaacctgtaatgctcattccagagtgtgatggcgtaagaatc
ctcacaaattcaagtatggaatttctacaccgagttccagattctactacattaattttt
ggcattggaagcatgtctccagcagcattactgtatgatgctagagatcactacgacaaa
caaagtgccaaggcttatgataactatcagctaatatcatcttccttgcccgaggcgatt
gaagcatgtattgatgctgctggatatgaattcgatgtttcacgccaacatacattactg
agagctgcgacttatggtctagctttctgcagtcgatttccacacgggcgctttcaagaa
atgtgcaaaattttacgcgttctaaatgctgttcgtgaccctgagattggaatgccgctt
accgtgaagcagtacagactgcttactgcaactgtgctcattggacgtctgattaatgct
aatcagcatcttttggcacttcgcatctctgagtaccttaacctgaatccggaggttgtg
attatgcattgggcatgtgagaagataacagcctcagctgcaattccagatgtagttctt
cttgaaggtttgcttgacaagctcaggttatgcaaaggcatatcatatgctgcagtggca
gctcatgcagataagagcggccggcgaaagttggctgccatgctcgttgaccacgagtcc
cagtcctcgaagcagattcctttgttgctaagcatcgatgaacaagacaaagcattacag
aagtcaattgagagcggtgatactgatcttgtgtaccttgtgcttttccatatctggcag
aagatatctgtagaaaagagcgctcctttggatttttttggtgtaatcaacgcaaggcct
ttggctagagatttgttcatagcatatgcaagacactctaagcatgaagctttgaaggac
ttctttctatcaacagggaggctccaagatgctggcttccttttgttgaaggagtcaaga
gaattagagaggaatccaatggcaagcaaggggtctcctctccatggtccacaagtgagg
ctcgttgagcaggcccacaggctttttgctgagaccaaagaacatctttttgaatccaaa
tctgctgaagagcatgccaaattgctaagagtgcagcatcaactagaagtttccacgaag
caagcaatatttgttggttctagtgtcagtgatacaataaaaacttgtattgtaatggga
aatgagcgagctgcagtcaaagtgaaatcagagttcaaggttcctgataaaaggtggtac
tggttgaagtcgtgtgctttagcaacagttggtaattgggatgctttggaaacattctcg
agagagaagagaccaccaggaggctataaaccatttgtggaagcatgcattgatgccggt
caaaaaactgaagctctcaaatatattccaaaattaacagatcctggtgaaagatctgag
gcatatgcgcgtctcaatatgactgaggaagctaaaaaggcagcatcagaggctaacaat
ggcgacgagctatttggtcgcctaaagagtactctggcgcagaatactcttatcgacaca
ctacgggatcgactatcgttccaaggaacgtactga
DBGET
integrated database retrieval system