KEGG   Triticum dicoccoides (wild emmer wheat): 119276489
Entry
119276489         CDS       T07278                                 
Name
(RefSeq) protein VACUOLELESS1-like
  KO
K20180  vacuolar protein sorting-associated protein 16
Organism
tdc  Triticum dicoccoides (wild emmer wheat)
Pathway
tdc04148  Efferocytosis
Brite
KEGG Orthology (KO) [BR:tdc00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04148 Efferocytosis
    119276489
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:tdc04131]
    119276489
Membrane trafficking [BR:tdc04131]
 Endosome - Lysosome transport
  Tethering complex
   CORVET complex
    119276489
   Hops complex
    119276489
SSDB
Motif
Pfam: Vps16_C Vps16_N WD40_WDHD1_1st
Other DBs
NCBI-GeneID: 119276489
NCBI-ProteinID: XP_037413451
LinkDB
Position
3B:454446931..454466579
AA seq 871 aa
MSSSVSVAAEWDLLSDRFYRRITIYSPLPWSSPATTTASSSGGGSSGVSRLDLSTHIVAA
APFGGPIAAVRDDSKIVQLHSEPSRRRLLLFSSSGHPLASSPWTPHLPRLHSLAFSSSLN
LLALLSDGSLLRFRLPDLNPITSSSPVPLLPPASGGVADAVFWGGGVAILTEDNRVVVTT
DIEVDDPHPRELADPGVAEDEQVLCMAVVEPQFVMSGSPEVLLAVGDRVVAVDEDGVQVL
GEALEIGPVQKMAVSPNGKLLAAFAHDGRLFVIPTDFSRIIFEYECDSALPPDQIAWCGL
DSVLLYWSEVLLMVGPNGDPVQYNYDEPVMLIPECDGVRILTNSSMEFLHRVPDSTTLIF
GIGSMSPAALLYDARDHYDKQSAKAYDNYQLISSSLPEAIEACIDAAGYEFDVSRQHTLL
RAATYGLAFCSRFPHGRFQEMCKILRVLNAVRDPEIGMPLTVKQYRLLTATVLIGRLINA
NQHLLALRISEYLNLNPEVVIMHWACEKITASAAIPDVVLLEGLLDKLRLCKGISYAAVA
AHADKSGRRKLAAMLVDHESQSSKQIPLLLSIDEQDKALQKSIESGDTDLVYLVLFHIWQ
KISVEKSAPLDFFGVINARPLARDLFIAYARHSKHEALKDFFLSTGRLQDAGFLLLKESR
ELERNPMASKGSPLHGPQVRLVEQAHRLFAETKEHLFESKSAEEHAKLLRVQHQLEVSTK
QAIFVGSSVSDTIKTCIVMGNERAAVKVKSEFKVPDKRWYWLKSCALATVGNWDALETFS
REKRPPGGYKPFVEACIDAGQKTEALKYIPKLTDPGERSEAYARLNMTEEAKKAASEANN
GDELFGRLKSTLAQNTLIDTLRDRLSFQGTY
NT seq 2616 nt   +upstreamnt  +downstreamnt
atgtcctcctccgtctccgtcgcggcggagtgggacctcctctccgaccgtttctaccgc
cgcatcaccatctactcccccctcccctggtcctccccggccaccaccaccgcctcctcc
tccggcggcggcagctccggggtcagccgcctcgacctctcgacccacatcgtcgccgcc
gctcccttcggcggcccgattgccgccgtccgcgacgactccaagatcgtgcagctccac
tccgagccctcgcgccgtcgcctcctcctcttctcctcatccggccacccactcgcctcc
tccccttggacgccccacctcccccgcctccactcgctcgccttttccagctccctcaac
ctcctcgccctcctctccgatggttccctcctccgtttccgcctccccgatctgaatccc
attactagctccagccccgtgcccctgctgccgcctgcctcaggcggcgtcgccgacgct
gttttctggggaggcggcgtggctatcctcaccgaggacaaccgcgtcgtggtcaccacc
gacatcgaagtcgacgacccgcacccgcgggagctcgccgacccgggcgttgccgaggac
gagcaggtgctgtgtatggccgtggtggagccacagttcgtcatgtccgggagtccagag
gttctgcttgcagttggcgatcgggtagtggcagttgacgaggatggcgtgcaggtgctc
ggagaggccctggagattggacccgtgcagaaaatggcggtgtcaccaaacggaaagctg
cttgcagcgtttgcacatgatgggcgcttgttcgtaatccccacggatttttccaggatc
atattcgagtatgagtgtgattctgcattaccaccggatcaaattgcttggtgtgggttg
gacagtgtgctcctttactggtctgaagtgcttttgatggttggacccaatggagatcca
gtgcagtacaattatgatgaacctgtaatgctcattccagagtgtgatggcgtaagaatc
ctcacaaattcaagtatggaatttctacaccgagttccagattctactacattaattttt
ggcattggaagcatgtctccagcagcattactgtatgatgctagagatcactacgacaaa
caaagtgccaaggcttatgataactatcagctaatatcatcttccttgcccgaggcgatt
gaagcatgtattgatgctgctggatatgaattcgatgtttcacgccaacatacattactg
agagctgcgacttatggtctagctttctgcagtcgatttccacacgggcgctttcaagaa
atgtgcaaaattttacgcgttctaaatgctgttcgtgaccctgagattggaatgccgctt
accgtgaagcagtacagactgcttactgcaactgtgctcattggacgtctgattaatgct
aatcagcatcttttggcacttcgcatctctgagtaccttaacctgaatccggaggttgtg
attatgcattgggcatgtgagaagataacagcctcagctgcaattccagatgtagttctt
cttgaaggtttgcttgacaagctcaggttatgcaaaggcatatcatatgctgcagtggca
gctcatgcagataagagcggccggcgaaagttggctgccatgctcgttgaccacgagtcc
cagtcctcgaagcagattcctttgttgctaagcatcgatgaacaagacaaagcattacag
aagtcaattgagagcggtgatactgatcttgtgtaccttgtgcttttccatatctggcag
aagatatctgtagaaaagagcgctcctttggatttttttggtgtaatcaacgcaaggcct
ttggctagagatttgttcatagcatatgcaagacactctaagcatgaagctttgaaggac
ttctttctatcaacagggaggctccaagatgctggcttccttttgttgaaggagtcaaga
gaattagagaggaatccaatggcaagcaaggggtctcctctccatggtccacaagtgagg
ctcgttgagcaggcccacaggctttttgctgagaccaaagaacatctttttgaatccaaa
tctgctgaagagcatgccaaattgctaagagtgcagcatcaactagaagtttccacgaag
caagcaatatttgttggttctagtgtcagtgatacaataaaaacttgtattgtaatggga
aatgagcgagctgcagtcaaagtgaaatcagagttcaaggttcctgataaaaggtggtac
tggttgaagtcgtgtgctttagcaacagttggtaattgggatgctttggaaacattctcg
agagagaagagaccaccaggaggctataaaccatttgtggaagcatgcattgatgccggt
caaaaaactgaagctctcaaatatattccaaaattaacagatcctggtgaaagatctgag
gcatatgcgcgtctcaatatgactgaggaagctaaaaaggcagcatcagaggctaacaat
ggcgacgagctatttggtcgcctaaagagtactctggcgcagaatactcttatcgacaca
ctacgggatcgactatcgttccaaggaacgtactga

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