Triticum dicoccoides (wild emmer wheat): 119276640
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Entry
119276640 CDS
T07278
Name
(RefSeq) uncharacterized protein LOC119276640
KO
K08735
DNA mismatch repair protein MSH2
Organism
tdc
Triticum dicoccoides (wild emmer wheat)
Pathway
tdc03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
tdc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
119276640
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tdc03400
]
119276640
DNA repair and recombination proteins [BR:
tdc03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
119276640
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MutS_III
RRM_8
MutS_II
RRM_1
Per1
Motif
Other DBs
NCBI-GeneID:
119276640
NCBI-ProteinID:
XP_037413662
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All DBs
Position
3B:complement(479777112..479783042)
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AA seq
830 aa
AA seq
DB search
MTIWYSEPTKIHHPLPAYHMFDEMSSQPELFTGGVLRITVHHVYYSVTEETLQQVFAAYG
VVKVSLFQRIHHLEAVVQLRSRVGAARALALHGRCVYEHACLLDIQDVSSEYNMHLCLLL
ELKQTATVAEYTTAFWEQVHRVLDLNSTISIQCFVHQYVKGLRADIQAAMQSQLPSSITR
ASSLARIKEEDIVKDAARAVEELDGCIGHGVQGLTPKETLTGVSPKLASHVVRGADHGVV
AIDTSSLAAPTLTTCSTDCPNRDATVNDFKTTGSFSPSRGMFSAVAARAETLPALELETL
KPNRCLTECSHDDANKVTHVVVLDASPLTTAQLNNILCNTSPCAMPWVCEDTDDEQIRKG
GVMQPLWPPRAPPSTWQLRFVEHTIANSTELKPWPDPWMSKSSGSGSRDKPPWAQNAVSV
GKSDKLRELYEKSGSSWRLTKSGTPGTIGSFEDIRCANNVMQYSPVTTALFPVFCGGHHS
FPRPCYKERCSFLQISQLYVGLSCVNMTNQKLGLTEFPEDSRFTNVESALVALHCKECLF
LADFEKSIDLDASRNCSILAAERKKAEFKSGDLVQDLGRIIKGSVEPVRDLLSQFDYALG
ALGALVLYDGLLADDTNYGNYTIEKYNLDCYLRLASAVVRTLNIVEEKTDGNNKFSLFAF
MNRVCTARMGQGLLNKWLYVNEVNNRLDMVQAFTENPELRRGLRQQLTRISDLDRLTHTL
HKKSANQPVVKLYQSCSRISYIKGVLQQYNGQFSRFRTRFLGSFEEWITENRYVPYVRPD
ITTSEGGDILLQGGWHPYKVQSVENYMKLSMGNITRAFLELHISPSGQPD
NT seq
2493 nt
NT seq
+upstream
nt +downstream
nt
atgacaatttggtattcagagccaacaaaaattcaccacccacttcctgcctaccatatg
ttcgacgaaatgtccagccaaccagagctgttcaccggcggcgttctccgcatcaccgtg
caccatgtgtactactcggttactgaggagacactgcagcaggtgtttgccgcgtatggt
gtggtgaaggtctccctgtttcagagaatccaccatttggaggcagtggttcagcttcga
tcaagagtcggcgcggcgcgggctctcgccttgcatggccggtgtgtctacgagcacgcc
tgcctccttgacatccaggatgtgtcgtcggagtataacatgcacttgtgcttgctgctg
gagctcaagcagaccgcaaccgtggccgagtacacgacggcattctgggaacaagtacat
cgtgtgctggatctcaactccaccataagcatccagtgctttgtacaccagtacgtcaag
ggcttgcgcgcggatattcaagcagccatgcagtcgcaattgccgtccagcatcaccaga
gcgtcgtcccttgctcggataaaggaagaggatattgtgaaggatgcggctagggctgtt
gaggagcttgacggctgcatcggccatggagttcagggcttaacgcctaaggagaccctc
actggcgtttcccccaagctcgcttcccatgtggtgcgtggtgcagaccacggagtcgtc
gccatcgacaccagcagccttgctgctccgacgctaaccacatgctcgacggattgcccg
aatcgcgacgccaccgtcaacgacttcaaaactacaggatcattctcgccctctagaggc
atgttttcggcagttgcagcacgggctgagactttgccagcccttgagttggagacattg
aagcccaacagatgtttgacagaatgctcccatgatgacgccaacaaggtgacccatgtg
gttgtgttagatgcatctccgttgaccaccgcacagctcaacaacatcctctgcaacact
tcaccttgtgctatgccttgggtgtgtgaggatactgacgacgagcagattaggaaaggt
ggtgtcatgcagccactatggccaccacgggcaccgccaagtacatggcagttgcggttc
gtggaacatactattgcaaactcaactgagctgaaaccatggccagatccatggatgagc
aagagcagtggaagtggaagccgggacaagccaccgtgggcgcaaaacgctgtcagtgtt
ggaaagagtgacaagcttcgggagctctatgagaaaagtgggtcaagttggaggttaaca
aaatctggaacacctggaaccattggcagtttcgaagatattcgttgtgcaaacaatgtc
atgcaatattccccggttactactgcattgtttcctgtcttctgtggaggtcaccattct
ttcccccgaccctgctacaaagaaagatgttcatttcttcaaatatcccagctatatgta
gggcttagttgtgtgaatatgacaaaccagaagcttgggttgactgagttccctgaagat
agtcgattcacaaatgtggaatcagcccttgttgcattacattgcaaggagtgtcttttt
ctagcagattttgagaaatcaatagatttggatgctagtagaaattgcagtattcttgcg
gctgaaagaaagaaggctgaatttaaatctggagatcttgtgcaggatcttggtagaata
atcaagggttctgttgagccagttcgtgacctcctatctcagtttgactatgctttgggt
gcccttggagctctagtattatatgatgggttgctagcagatgatactaattatggaaat
tacacgattgagaaatacaatttggactgctacctgcgccttgcttctgccgtggtgcga
acattgaatattgttgaagaaaaaactgatggaaacaacaaatttagtttgtttgctttc
atgaacagagtgtgtactgctaggatgggacaaggactacttaacaaatggctatatgta
aacgaagtcaataacagattagatatggttcaggctttcacagaaaatccagagcttcgt
cggggtcttaggcaacaacttacaaggatatctgatcttgatcgcctaacacacactctc
cataagaaatcagccaatcagcctgttgttaagctctaccagtcctgctctagaatctca
tacatcaagggtgttcttcaacaatacaatggccaattttctagattcaggacaaggttc
cttggctcttttgaagagtggataacagagaatcgatatgttccttatgtaagaccagac
atcacaacatcggagggaggagatattcttctacaaggtggttggcatccatataaagtg
caatcagttgagaactacatgaagctttctatgggcaatattactcgagcctttctagaa
ttacacatctctccttcggggcaacctgattag
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