Triticum dicoccoides (wild emmer wheat): 119276693
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Entry
119276693 CDS
T07278
Name
(RefSeq) serine/arginine-rich-splicing factor SR34-like isoform X1
KO
K12890
serine/arginine-rich splicing factor 1
Organism
tdc
Triticum dicoccoides (wild emmer wheat)
Pathway
tdc03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
tdc00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
119276693
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
tdc03041
]
119276693
Spliceosome [BR:
tdc03041
]
Common components
Common spliceosomal components
SR proteins
119276693
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RRM_occluded
RRM_7
RRM_3
Nup35_RRM_2
Motif
Other DBs
NCBI-GeneID:
119276693
NCBI-ProteinID:
XP_037413721
LinkDB
All DBs
Position
3B:complement(490631354..490635995)
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AA seq
255 aa
AA seq
DB search
MGRRNSCTIYVGNLPGDIREREVEDLFYKYGRIVDIDLKIPPRPPGYAFVEFEDPRDADD
AIYGRDGYDFDGYRLRVELAHGGRAQSYSYDRPSSFSNGRRGGVSRRSEFRVMVDGLPSS
ASWQDLKDHMRRAGDVCFSDVYREGGATVGVVDYTNYDDMKYAIRKLDDTEFRNAFSRAY
IRVREYDARSRSRSRSLSYSRSRSYSRSVSRSPLPMDERSPSRSRSPVSLVSGKSVSRSP
RSRSLSRSASPVRSD
NT seq
768 nt
NT seq
+upstream
nt +downstream
nt
atgggcaggcgcaacagctgcacgatttatgtaggcaatctccctggggacattcgtgag
agggaggttgaggatctcttttacaagtatggccgtattgtcgatattgacttgaagatt
cctccaaggcctcctggttacgcttttgttgagtttgaggatccccgtgatgctgatgat
gcaatttatggccgcgatgggtatgactttgatggctacaggctgcgggtggaattagct
catggtggaagagctcaatcttactcgtacgatcgcccaagcagctttagcaatggacgc
cgtggaggtgtttctaggcgctctgagttccgagttatggttgatggtttaccttcgtca
gcgtcatggcaagatctcaaggaccatatgcgacgggctggcgatgtctgtttttctgat
gtataccgcgagggcggagcaaccgttggagttgtggattatacaaactacgatgacatg
aaatatgcgattaggaagctcgatgatacagagttcagaaatgcattttcaagggcatat
atcagggtgagggagtatgatgctagatcaagaagcaggagccgtagcctctcttactca
agaagtcgcagctatagcagatctgtctctcgatcacccttacctatggatgaaaggtca
ccatcaagatctcggtctcctgtttcattggtttctggaaaatccgtgagcagaagccct
cggagcaggagcttatcccgctctgcatctcctgtgaggtcggattga
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