KEGG   Triticum dicoccoides (wild emmer wheat): 119277050
Entry
119277050         CDS       T07278                                 
Name
(RefSeq) DNA-directed RNA polymerases II, IV and V subunit 12
  KO
K03009  DNA-directed RNA polymerases I, II, and III subunit RPABC4
Organism
tdc  Triticum dicoccoides (wild emmer wheat)
Pathway
tdc03020  RNA polymerase
tdc03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:tdc00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    119277050
  09124 Replication and repair
   03420 Nucleotide excision repair
    119277050
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:tdc03021]
    119277050
   03400 DNA repair and recombination proteins [BR:tdc03400]
    119277050
Transcription machinery [BR:tdc03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol I, II, III common subunits
     119277050
  RNA polymerase III system
   RNA polymerase III
     119277050
  RNA polymerase I system
   RNA polymerase I
     119277050
DNA repair and recombination proteins [BR:tdc03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      119277050
SSDB
Motif
Pfam: Zn_ribbon_RPAB4 Zn_Ribbon_YjdM DUF7577 DUF5816 DUF7129 Zn_ribbon_13 HypA DmmA-like_C A2L_zn_ribbon CoiA_N Cas12f1-like_TNB DUF6237 DUF1451 Zn_ribbon_LysW
Other DBs
NCBI-GeneID: 119277050
NCBI-ProteinID: XP_037414157
LinkDB
Position
1A:425653562..425657295
AA seq 52 aa
MDPQQPEPVSYLCGDCGAENTLKTGDVIQCRECGYRILYKKRTRRIVQYEAR
NT seq 159 nt   +upstreamnt  +downstreamnt
atggatccacagcagccggaacccgtcagctatctgtgcggagattgcggagctgagaac
acgctgaagacaggggatgtgatccagtgccgtgagtgtggctaccgcatcctctacaag
aagcgcacccgcaggattgttcaatacgaagctcgctga

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