Triticum dicoccoides (wild emmer wheat): 119277268
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Entry
119277268 CDS
T07278
Name
(RefSeq) putative E3 ubiquitin-protein ligase RING1a
KO
K10695
E3 ubiquitin-protein ligase RNF1/2 [EC:
2.3.2.27
]
Organism
tdc
Triticum dicoccoides (wild emmer wheat)
Pathway
tdc03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
tdc00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
119277268
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
tdc04121
]
119277268
03036 Chromosome and associated proteins [BR:
tdc03036
]
119277268
Enzymes [BR:
tdc01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
119277268
Ubiquitin system [BR:
tdc04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
119277268
Chromosome and associated proteins [BR:
tdc03036
]
Eukaryotic type
Histone modification proteins
Polycomb repressive complex (PRC) and associated proteins
Canonical PRC1 (PRC1.2/1.4)
119277268
Noncanonical PRC1 (PRC1.1)
119277268
Noncanonical PRC1 (PRC1.3/1.5)
119277268
Noncanonical PRC1 (PRC1.6)
119277268
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C3HC4_2
zf-C3HC4
zf-RING_2
zf-RING_UBOX
zf-RING_5
zf-C3HC4_3
zf-C3HC4_4
zf-RING_4
zf-RING_6
zf-UDP
zf-rbx1
zf-Nse
TRAF3_RING
zf-RING_11
zf-C3HC4_5
zf-RING_10
ZNF512_C2HC
Motif
Other DBs
NCBI-GeneID:
119277268
NCBI-ProteinID:
XP_037414421
LinkDB
All DBs
Position
3B:complement(589180586..589184756)
Genome browser
AA seq
477 aa
AA seq
DB search
MPAQKRQLPLPSSSKPRDHVEANGADAPSAGAAGGGGGGLHPTPAGGAANRATDPQPLRA
GDSGAMSGGGGAYSDTESSESDGDMDEFVLVKLAEIRKEVQCPICLGIIRKTRTVMECLH
RFCRDCIDKSMRLGNNECPACRTHCASRRSLRDDPNYDALIATLYPDIDKYEEEELAFGE
EERTRNKKIQATIEEMIRKQSEALGKKRPTAKATASAFARKYRRNVRTRGRGRTVARDIA
PTGSDDEDREEENANVESKESPSPDNQSPDLRQRRGRKRPAPTPSPARTIASSDHGSEEN
DEVVSLKEGFTTSPLRGEMLAWGKNGTRSQTRYNNAGGTNGRLGKGGRFAKLVDHLRATD
ENKEFNLYLVLLPLDGQTTPNLEKPYLSCRPRVSIRHLLQFIALQLSRQVEELEMYIRVD
LHNRSVAVKDSGSAETKLSLFDGLERLREDKLLLDLHPSFASGNGDLELIYALKRQG
NT seq
1434 nt
NT seq
+upstream
nt +downstream
nt
atgcccgcgcagaagcgccagctccccttgccatcgtcctccaaaccccgcgaccacgtc
gaggccaacggggcggacgctccctcggccggcgccgccggcgggggaggaggagggctc
catccgacgccggccggaggcgccgccaatcgggcgaccgacccgcagccgctgcgcgca
ggcgattcgggcgcgatgagcggcggcggcggcgcgtacagcgacaccgagtcgtcggag
agcgacggcgacatggacgagtttgtgctcgtgaaattagcagaaatccgaaaagaagtc
cagtgcccaatctgtttaggcattatccggaagacaagaacggttatggaatgtttgcac
cgattctgcagggattgcattgataaatctatgaggctaggaaataatgagtgtccagca
tgccgtactcattgtgcaagtcgacgttctttgagggatgatcctaattatgatgcactt
attgcaaccttgtatccagatattgataagtatgaggaagaggaacttgctttcggtgaa
gaggagaggactcggaataagaagattcaagcaaccatcgaggagatgattcgaaagcag
tcggaggccctcggtaagaagcgtcctacggcaaaagctactgccagtgcttttgcaagg
aagtacaggagaaatgtgcgtacccgtgggagaggtagaacggttgctcgtgatattgcc
cctactggctctgatgatgaggatagagaagaagaaaatgctaatgttgagagcaaagag
tcgccttctcctgataaccagtctccagatttaaggcagagaagaggtagaaaaaggcct
gcaccaacaccttctcctgctagaaccattgccagtagtgaccacggatctgaggagaat
gacgaagtagtatctctaaaagaaggtttcaccacctctccattgcggggtgagatgctc
gcatggggaaaaaatggcacaagaagccaaactcggtacaacaatgctggtggaacaaac
ggcaggctggggaagggtgggcgtttcgcgaagttggtggaccacctccgtgcaactgat
gaaaacaaggagttcaacttgtatcttgttcttcttcctcttgatggacaaacaacgcct
aacttggaaaagccctatctaagttgtcgaccaagggtgtccattcgacatcttctacag
ttcattgctcttcagttgtctcggcaagttgaagaacttgagatgtatataagggtggac
ctccacaatagaagtgttgcagtgaaggactctggttctgctgagacaaaactgtctctc
tttgatggcttggaaagattgagggaagacaagcttctgttggaccttcacccttcattt
gcctctggtaatggtgatctggaattgatatatgctctgaaacgccaaggctag
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integrated database retrieval system
