Triticum dicoccoides (wild emmer wheat): 119277288
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Entry
119277288 CDS
T07278
Name
(RefSeq) DNA-(apurinic or apyrimidinic site) endonuclease, chloroplastic-like isoform X1
KO
K01142
exodeoxyribonuclease III [EC:
3.1.11.2
]
Organism
tdc
Triticum dicoccoides (wild emmer wheat)
Pathway
tdc03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
tdc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
119277288
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tdc03400
]
119277288
Enzymes [BR:
tdc01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
119277288
DNA repair and recombination proteins [BR:
tdc03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
119277288
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
Exo_endo_phos
SAP
Exo_endo_phos_2
Rho_N
LETM1_RBD
Motif
Other DBs
NCBI-GeneID:
119277288
NCBI-ProteinID:
XP_037414438
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Position
3B:592727808..592733869
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AA seq
517 aa
AA seq
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MQLLLRCGSLLRLYECSGGLPRTNYSCRKLVLPILNVMSERTRITYSRRAVSKNSEIKKD
EQTVIEKEDDTESTLEIERIRGDPSMLQSMTVKELKELTRTMGVAARGNKKDLVSALMES
LGEEVIGKEGASTIEQIGPSEVPSKRKGAASVVVEQKLETSEVISATPSKRSRTKQKSIK
GTTPEENPVTTVKINKTSHKKETVVANGAIAKAGLGLNVDGAEPWTVLVHKKPQAEWIPY
NPKVMRPPPLSKDTRALKILSWNVNGLKALVKNRGFSVHELAQREDFDVLCLQETKIQEK
DVDVIKESLLEGYTNSFWTCSVSKLGYSGTAIISRVKPLSIKYGLGVPDHDTEGRIVTVE
FDDFYLLTAYVPNSGDGLKRLTYRVTEWDPCLGNYMKELEKSKPVILTGDLNCAHQEIDI
HDPAGNSRSAGFTKEERKSFETNFLSKGFVDTFRKQHPDVVGYSYWGYRHNCRKTNRGWR
LDYFLVSESIAERVHDSYILPDVSASDHSPLGLILKL
NT seq
1554 nt
NT seq
+upstream
nt +downstream
nt
atgcagctgctcctgcgctgtggctctctcctccgtctctacgagtgtagcggtgggctt
ccaagaacaaattacagttgtagaaaattagtgcttccaatactaaacgtgatgagtgag
aggacgcggattacctattcacgtagagctgtctctaagaacagtgagatcaagaaagat
gaacaaacagtcatagaaaaggaagatgacactgaaagcacattggagatagagcgaatc
agaggtgaccctagtatgctccaatccatgacagtgaaagaactcaaggaactcacaagg
acgatgggagttgctgcgagaggtaacaagaaagatttggtatcagctctgatggaatct
ctgggtgaggaagtaattggtaaagagggagcatcaaccattgagcagattggcccatca
gaagtaccttcaaaaagaaaaggtgctgcttcagtagtggttgaacaaaagctagaaact
tctgaagttatttccgcaactcctagcaagagaagtagaaccaagcagaaatcaattaag
ggcaccactccggaggagaaccctgtgactactgtcaagataaataaaacatcacacaag
aaggaaacagttgttgccaatggtgctattgcaaaggcggggttgggtcttaatgtggat
ggtgcagagccttggactgtacttgtacacaagaagccacaggctgagtggattccgtac
aatcctaaggtcatgaggcctccaccccttagcaaggatacaagggcactaaagattcta
tcatggaatgtcaatggactgaaagctctagtaaaaaataggggcttctccgttcatgag
ttagcacagagggaggattttgatgtgctatgcctgcaagaaacgaaaattcaggagaaa
gatgttgacgtcatcaaggaaagtctacttgaagggtataccaatagtttctggacatgt
agtgtgtcaaagcttggatattcagggactgccataatttcacgggtgaaaccactttct
atcaagtatgggcttggtgtaccagaccatgatacagaagggaggattgtgacagtggaa
tttgatgatttttacttgctaaccgcttatgtgccaaattccggtgatggtctcaaaaga
ttgacttacagagtcacagagtgggatccatgccttggtaactacatgaaagaattggaa
aaatcgaaacctgtcatactaactggtgatcttaactgtgcgcatcaggagattgatata
catgatcctgctggaaatagtagaagtgccggcttcacaaaagaagaaaggaaatcgttc
gagactaattttctgtccaaagggttcgtggatacgtttcggaaacagcaccctgatgtt
gttggatatagctactggggttataggcataattgccggaagactaatagaggttggcgc
ctggattactttctcgtgtcggagtccatcgcggaaagagtccacgattcatacatcctt
cccgacgtttctgccagtgaccacagcccgctcggcctcatactgaagctctaa
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