Triticum dicoccoides (wild emmer wheat): 119277648
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Entry
119277648 CDS
T07278
Name
(RefSeq) nuclear pore complex protein NUP62-like
KO
K14306
nuclear pore complex protein Nup62
Organism
tdc
Triticum dicoccoides (wild emmer wheat)
Pathway
tdc03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
tdc00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
119277648
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tdc03019
]
119277648
Messenger RNA biogenesis [BR:
tdc03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
119277648
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Nsp1_C
Nucleoporin_FG
NAP
APG6_N
SGT1
COG3_N
Motif
Other DBs
NCBI-GeneID:
119277648
NCBI-ProteinID:
XP_037414828
LinkDB
All DBs
Position
3B:complement(655186709..655193082)
Genome browser
AA seq
727 aa
AA seq
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MATSFAFGNSGGAGSTSSSPFSFSTAPSAFSSSPAPAFGSSPAPAFGSSPAPAFGSSPFS
ATTASSAPAFGSSLFGSTPASASAPATATASSPSAFGFGATGFGFSQPAATASASPLFGA
PATSAAATTPSIFGAATTTPSPFGASATSSAATTPSLFGAVSSPAATPGLFGATTAAAST
PSIFGAVSSAPSTPGLFSGAATGFGFGSSASGSAAASTPSFGFGAPAASSTATTSASAPA
LFGAATGGSSLFGSTSTAPLFGAAASSPATTATTAPSLGFSLAPATTVSAPSFGFTPASG
STTTASTASSLFSGASSASAFSFSNSASAAPTTPASAPASGFSLATSQAASAPSLFSNTG
AAASSSATSLSSPFGASFATPTPTFGSASATSASTVPSAAAAPAPATSGSSLFSASGFSF
TVPQASSAAAVTTTATTITTSAATTPSTTTTAFPSFSLQASTPAPGSTSAAQSTLLGGST
TAASTLATIATTSQATSSAIQASSTGASTSAITPAAPQAAKLPSEIVGKCVEEIIRDWNN
GLQDRTAKFRKHATAISEWDRRILQNRNVLIRLEADVAKVVETQTSLERQLELIETHQKE
VDKALQSMEEEAERIFQDERVLLREDEAASARDIMYEQAEVVENELQHMTEQVKSIIQTM
NSTQGGELEATDTMAPFDVAVRILDNQLRSLMWIDEKANEFSNRIQRLPNNSTAAERDSG
IPRFWLS
NT seq
2184 nt
NT seq
+upstream
nt +downstream
nt
atggcgacctccttcgcgttcggcaattccggcggggcgggatccacctcgtcctccccc
ttctccttctccaccgccccatccgccttctcctcgtcccccgcccccgcgttcggctcg
tcccccgcccccgcattcggctcctcccccgcccccgcattcggttcgtcccccttctcc
gcgaccaccgcttcctctgctccggcttttggttcatccctcttcggatccacccccgcc
tccgcgtccgctccggccaccgccaccgcttcctccccgtccgctttcggcttcggggcc
actggtttcgggttctctcagcccgcggccaccgcgtccgcctcacccctcttcggcgca
cccgccacctccgccgcggcaaccacgcctagcatattcggggccgccacgaccaccccc
agccccttcggtgcatcggccacctcgtctgcggccaccaccccgagcctcttcggggcc
gtctcctcccccgcggccacaccaggtctcttcggtgcgaccaccgccgccgccagcacc
cccagtatattcggcgctgtctcttccgctccgtccacgcctggccttttctctggcgcc
gccacgggattcggctttggctcatcggcatcaggctccgccgccgcttcgacaccgtca
ttcggcttcggcgcgcccgccgcatctagcaccgctactacctcggcttcggcaccggct
ctgtttggggccgccactggtggctcgtccttgtttggatctacctccaccgcgccgttg
ttcggtgccgcggcctcgtctcctgcaaccactgccacgaccgcgccatcccttggcttt
tcattagcgccagcaactactgtctctgctccgtcgtttggtttcacgccggcatcagga
agcacaacgacggccagcaccgcctcttccttgttctcgggtgcttcttcagcctctgcc
ttctcgttctccaacagtgcatccgctgctcccaccacgcctgcctctgcgcccgccagt
ggtttctccttggccacttcgcaggctgcatctgctccgtcattgttctctaatactggt
gcagctgcaagctcgtcggcgacctctcttagctccccgttcggtgcatcttttgctact
cccacgccaacgtttggttctgcttccgcaacgagtgcatccactgttccatcagctgcg
gctgcccctgcccctgcaacctcggggtcatcattgttctccgctagcggtttcagcttt
acagtcccgcaggcgtcatcagctgcagcagttacaaccactgccaccactatcactact
tctgcagccacgactccttctaccacaacaactgcatttcctagttttagcttgcaagct
tccacaccagctcctggctcaacttcggcagctcagtctacactgcttggcggttctact
acagctgcaagcacactagccaccatcgccaccacaagtcaggcgacttcctcagctatt
caagctagcagcactggagctagtacgagtgccatcactccagcagcacctcaagcagct
aagcttccgtcagaaattgttggtaaatgtgtcgaggagattattagggactggaacaat
ggtcttcaagaccgcactgcaaagttccggaagcatgcaactgccatatctgaatgggac
aggagaattctgcaaaacaggaatgttcttataaggcttgaggctgatgtggccaaagtt
gttgaaacacaaacaagcttggagaggcaacttgagttgatagaaactcatcagaaagag
gtggacaaggctctgcagagcatggaggaggaagccgagcgtatattccaggatgaacgg
gtcttacttcgtgaagatgaggctgcctcggcaagggatataatgtacgagcaagctgaa
gttgtggagaatgagttgcagcatatgacagaacaagtgaaatccatcattcagaccatg
aattctactcagggtggtgagcttgaggctacggataccatggcaccatttgatgttgct
gtccgaatactggataatcaactgcgctctctaatgtggattgatgagaaggcaaacgag
ttctcaaacagaatacagagactgcccaacaatagtactgcggctgagcgcgactctgga
atcccaaggttttggttaagctga
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