Triticum dicoccoides (wild emmer wheat): 119277742
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Entry
119277742 CDS
T07278
Name
(RefSeq) sister chromatid cohesion protein PDS5 homolog A-B-like isoform X1
KO
K11267
sister chromatid cohesion protein PDS5
Organism
tdc
Triticum dicoccoides (wild emmer wheat)
Brite
KEGG Orthology (KO) [BR:
tdc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
tdc03036
]
119277742
03400 DNA repair and recombination proteins [BR:
tdc03400
]
119277742
Chromosome and associated proteins [BR:
tdc03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Other sister chromatid cohesion factors
119277742
DNA repair and recombination proteins [BR:
tdc03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Shu complex and associated proteins
119277742
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PDS5
TPR_DNAAF5
HEAT_EF3_N
HEAT_GCN1
Cnd1
HEAT_GCN1_C_2
HEAT_GCN1_C
Motif
Other DBs
NCBI-GeneID:
119277742
NCBI-ProteinID:
XP_037414953
LinkDB
All DBs
Position
3B:complement(670572646..670586838)
Genome browser
AA seq
1292 aa
AA seq
DB search
MSASPGQVVSEVGKRLAQPRLGKDALVKLLKQAESALSELSQSSSLQDALRPLSKSLVQN
TLLSHKDKDVRLLVAVCFIEVMRILAPDPPFTDEIFKEIFRLFISEFSGLADTGSPYLTR
RMKILENVAALRCSVIMVDTGCQDLVLDMAKIFFSAAKQGLQQCVHQAMLSIMTQILNEK
VTQPLLDVIFRNLVKDDKGGAHKLAVDIIQNCAEKLEHIVRIFLTSCILSKDAPVNEHRK
LHHKIILEIFQCAPQMLFAVIPCLTHELLSDQVDIRLEAVHLIGKLLVFSNLRFGQENQI
LFMEFLKRFSDKSAEVRIAAIDAAKACYIAASSGNVAQNVLKSLEGRLLDFDDKVRIRAV
YAVCDLAKSNLSSFPSELILQAAERLRDKKISVRKNVMHKLLDLYRDYCEKCSKGTAAIN
THYEQIPAKLIVLCFDKDCESFRPHNMGLIFAEELFPSPLSPKERAMHWVEFFSYFKSQH
VKALHAIFSQKRRLQMEMQAYLSLRAKKEDSSDEIQKKICASLRKMSASFTDISKVEDCF
ENLHQMKDNNIFKDLTEISKEGTTYATVRSIRDSFLKRIGNKHQIYSFCKELSTKLSNSL
FNWEMICAILEVLFSCRNELTHYAESACDLLLLVAMAFPSLFRGSEEYLLKLFTEDSVLI
NEKSLKMLAYLAKSPCNLSINFSSDVYLLLEQKCIEGTRAESKYAISAIASLIQSPDDKK
FAKLCKKVVGGLHDSHNIPTLLQSLGLILEYSPSMYTSYDDQFINFVQRVFVSPEFVSTP
ELSPSNENSACSFSCKLKIYCLKALVKSCLPTTTARDRIENFLKMLLDIIREEFTPITIC
ENDKPYLRLAAGKSVLRLATRWDSLISPELFRTALLMARDSSYIVRKSFIHKLFGLLKKH
AIPVRYACAFALASTDCAGDVRTESLRYLTEVVKEQRGVSVHQNKTSNDSIVEHPAYAVL
FLIHTLACDEEFPFNFCEKESGSAEFWSPLIVMLRELVEIEDLSQTKHGSATSSVSILLG
IFRAVQKAEDVIDSDITHKLHILSKIGLLMVKELDKHCKTSDSPRHILLPSSYYRLSRSE
RKADECCQLDLITDTFVKRILKAHEPYNQQEDTTCSTITERVSKESAPRRQTRSSSNKPL
FGQFVSGHEQGKTKKSSVQAKDVPKKNYLDILEKDNVSSCGSAGTKLSSPGSLGLTNEAD
SRDLKTISSKDTMSTEDFPDCHLRDCSELDEDVGDCDGNFVKRPFSSNKTAVAALKKKSK
RALDLRNAKNSAGSAVDTIDNVRRTRSRKAQT
NT seq
3879 nt
NT seq
+upstream
nt +downstream
nt
atgtctgcctcgccggggcaagtcgtgagcgaggtcggcaagcgcctcgcgcagccgcgc
ctcggcaaggacgccctcgtcaagctcctcaagcaagctgaaagtgctttatcagagttg
agtcagtcctcctctctgcaagatgctctacgtcctttgagtaaatcactggtccagaac
actttacttagccacaaggacaaggatgtcagacttcttgttgctgtctgcttcattgaa
gttatgcgaatccttgcacctgatccaccttttactgacgaaatatttaaggaaatattt
aggctcttcatcagcgaattttcagggcttgcagacaccgggagtccatatcttacgaga
aggatgaaaatattggagaatgttgctgcgcttagatgctctgtaattatggttgacact
ggttgtcaggacttggttcttgatatggccaaaatattcttctcggcagcaaagcaaggt
cttcagcaatgtgtgcaccaggctatgctatcaataatgacacaaatattaaatgaaaaa
gttactcagcctcttctggatgtgattttccgcaatttagtaaaagatgacaagggagga
gcccacaagcttgctgttgacatcattcaaaactgtgctgagaaattggagcacatagtt
cgaatttttttgacatcatgcattttgagcaaggatgcaccggttaatgaacacaggaag
ctgcatcataaaattattctggaaatattccagtgcgcaccccagatgctttttgctgtt
attccatgcttaactcatgagctcctgagtgaccaggttgatatccgactggaggcagtg
cacctgattgggaagcttcttgtcttctctaatcttcgctttggtcaagaaaaccagata
ttatttatggaattcttgaagagattctctgacaaatctgcagaagtaagaattgctgca
attgatgcagcaaaagcatgctacattgctgcatcatctggaaatgtagcacagaatgtt
ctcaaatctcttgaaggaaggctattggattttgatgacaaagtgaggatccgagctgtt
tatgcagtttgtgatttagccaaatcaaatctaagctcatttccttctgagttgatatta
caagcagcagagaggctacgtgacaaaaagatatctgtcagaaagaatgtaatgcataag
ttgctggacctgtatcgagattactgtgagaaatgctccaaaggaactgcggcaattaat
actcactatgaacaaatcccagctaaacttattgttctctgttttgacaaagattgtgaa
tctttcaggccacacaatatggggcttatttttgctgaagaactctttccatcaccactt
tctccaaaagaaagagcaatgcattgggttgagtttttttcttatttcaaatcacaacat
gttaaggctttgcatgccatcttttctcagaaaagaaggttgcaaatggagatgcaagca
tatttatcacttcgagcaaagaaggaagattcttcagatgaaatacagaagaaaatttgt
gcgtcattaaggaagatgtctgcttcctttacagatatctctaaagttgaagactgcttt
gagaatttgcaccagatgaaggataataacatatttaaggatttgactgaaataagcaaa
gagggcactacttatgcaacagttcgatcaatcagagattcatttctcaagagaattggt
aacaaacaccaaatttacagcttctgcaaagaactgtctacaaaactctcgaattcacta
tttaattgggagatgatttgtgccattttggaggttcttttctcctgcagaaatgaatta
acccattatgcagagtctgcatgtgatcttttactgctagttgcaatggcgtttccatca
ttattcagaggctcagaggagtacttgctaaagttgttcaccgaagactcagtcctgata
aatgagaagagtctcaaaatgttggcatatttggcaaaatcaccgtgtaatttatctatt
aatttcagtagtgatgtctacctcttactggagcaaaagtgtattgaaggaacacgtgct
gaatcaaaatatgccatttctgcaattgcttcactgatccagtctccagatgacaagaaa
tttgccaaattatgtaagaaagttgttggtggtctacatgatagtcataatatcccaact
ctattacagtcgttgggcttaatattggagtattctccttccatgtatacatcatatgac
gaccaatttatcaattttgttcaacgtgtttttgtctcacctgagtttgtttcaactccg
gaactgtcaccctccaatgaaaattctgcatgcagtttctcttgcaaactgaagatttat
tgtctcaaagcacttgtcaaaagttgtttaccaacaactactgcccgtgatcgaattgag
aatttcttgaagatgctgttagatataattcgtgaagaattcacgcccattactatatgt
gaaaatgataagccatatcttagactggccgctgggaaatctgtactacgactagctaca
agatgggattcactcatttctccagaattatttcgcactgcccttctcatggccagggat
tcttcatatattgttcgcaagtcattcattcacaaactttttggccttttgaagaagcat
gcaatacctgttagatatgcatgtgcttttgcattggcatcaacagattgcgctggagat
gttcgtactgaatcacttaggtacttaactgaagtggtaaaagagcaaagaggagtttct
gttcatcagaacaaaaccagcaatgactcgattgtagagcacccagcatatgctgtcctt
ttcttgatccatacgcttgcatgtgatgaggagtttccttttaacttttgtgaaaaggag
tctggctctgctgagttttggagcccacttattgtgatgttgagagagctagttgaaata
gaggatctgagccaaaccaagcatggctctgccaccagctctgtatccattcttttgggc
atctttcgtgctgttcaaaaggctgaggatgtgattgattctgacatcactcataaactg
cacattctctcaaaaattggtttgcttatggtaaaagaacttgataagcattgcaagaca
tcagattctccacgccatattctcctgccctcatcttattataggttgtctcggagtgag
agaaaagcggatgaatgctgccaactagatttaattactgatacttttgtgaagagaatt
ctaaaagctcatgaaccttataaccaacaggaggatactacatgctctactattactgag
agggtatctaaagaatctgctcctagaaggcaaactcgttcctcatcaaacaaaccatta
tttggacagtttgtaagtggtcatgagcaagggaaaacaaagaaaagttcagtccaggcg
aaagatgtccccaagaaaaattacctggatatcttggaaaaagacaacgtgtcatcttgt
ggttccgccggcacaaagctgtcatctccagggtctttgggtttgactaatgaagctgat
tctagagatctgaagacaatatcttcaaaggacaccatgtcaacagaggactttcctgac
tgtcatctcagagattgcagtgaactagacgaagatgttggtgattgtgatggtaatttt
gtgaagcgtcctttctccagcaacaaaacagcagtggctgccctcaagaagaaaagcaag
agagcattggatttgagaaatgcaaaaaattctgctggatcagccgtggacacaatagac
aatgttcgacggaccagatcaaggaaggcgcaaacatag
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integrated database retrieval system
