Triticum dicoccoides (wild emmer wheat): 119277817
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Entry
119277817 CDS
T07278
Name
(RefSeq) vacuolar protein sorting-associated protein 53 A-like
KO
K20299
vacuolar protein sorting-associated protein 53
Organism
tdc
Triticum dicoccoides (wild emmer wheat)
Brite
KEGG Orthology (KO) [BR:
tdc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tdc04131
]
119277817
Membrane trafficking [BR:
tdc04131
]
Protein recycling
Others
EARP complex
119277817
Endosome - Golgi transport
Tethering complex
GARP complex
119277817
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vps53_N
VPS53_C
RINT1_TIP1
COG7
Vps54_N
COG4_N
MPH2
CTV_P33
Motif
Other DBs
NCBI-GeneID:
119277817
NCBI-ProteinID:
XP_037415036
LinkDB
All DBs
Position
3B:679833630..679843013
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AA seq
838 aa
AA seq
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MDKSSALEYINQMFPTEASLSGVEPLMQKIQSEIRRVDASILAAVRQQSNSGTKAKEELA
AATNAVQELMYKIREIKTKAEQSETMVQEICRDIKKLDCAKRHITTTITALHRLTMLVSA
VEQLQVMASKRQYKEAAAQLEAVNQLCSHFEAYRDVPKISELREKLKNIKKILKSHVYSD
FTSLGTGKETEDEDLLQQLSDACLVVDALEPSVREELVKNFCSKELISYKQIFDGAELAK
LDKTERRYAWIKRRLRSNEDTWKIFPPSWHVDYLLCIQFCKITRTQLVDILNNLKEKPDV
ATLLLALQRTLEFEEELAEKFSGGTTTARNKELESDDENEGTEHNKIVSDIRKKYEKKLG
VPNDEAEQDKEKQKDLSVPGAGFNFHGIISSCFEPYMAVYIELEEKSLVEQLDKLIQEEK
WEIEEGSQTNILSSSMQVFLVIRRSLKRCSALTKNQTLFNLFQVFQRILKAYAAKLYARL
PKGGTGIVAAATGTDGQIRTSDRDEKMICYIVNTAEYCHQTSGELAENVAKIISSQFSDK
VDMSDVQDEFSAVITKALMTLVHGVETKFDAEMVAMTRVPWSTLESVGDQSEYVNGISSI
LSSTVPVLGSLLSPTYFQYFLDKLAASLGPRFYLNIYKCKHISETGAQQMLLDTQAVKTV
LLDIPALGKQTTVAASYSKFVTREMSKAEALLKVILSPVDSVASTYRALLPEGTPLEFQR
ILELKGLKKADQQAILEDFNKHSPSIKHPTITPTAAPPVATATASVPMAPVPLPTQAVAA
SPSMSTALTGALANREDVLARAAALGRGAATTGFKRFLALTEAAKDRKDGPFRKLFNA
NT seq
2517 nt
NT seq
+upstream
nt +downstream
nt
atggacaagtccagcgccctcgagtacatcaaccagatgttccccaccgaggcgtcgctg
tcgggggtcgagccgctgatgcagaagattcagagcgagattcgccgggtggacgccagc
atcctcgccgccgtccggcagcagagtaactcgggaaccaaggccaaggaagaacttgct
gctgccacaaatgctgttcaggaactaatgtataagatacgtgaaataaaaacgaaggct
gagcaaagtgaaacaatggttcaagaaatctgccgagacattaaaaagttggattgcgcc
aagaggcatataacaactacaataacggctcttcaccgccttactatgcttgtttctgct
gtcgagcaacttcaggtcatggcctcaaagcgtcagtacaaagaagcagctgcacaactc
gaggcagtgaaccagttgtgcagtcattttgaagcctatcgggatgtgccaaaaatatca
gagctcagagagaaactcaagaacatcaagaaaatcctcaaatcacatgtatattcagat
tttacaagcttagggactgggaaggaaacagaagatgaggatctattgcagcagctatct
gatgcttgtttggtggttgatgctctggaaccgtccgtgagggaagaactagtaaagaat
ttttgcagcaaggagcttatctcgtataagcagatctttgacggagcagaattggccaag
ttagacaagactgaaaggagatatgcatggattaagcgccgattgcggtcaaatgaagat
acctggaaaatatttccaccttcctggcatgttgattatctgttgtgtatccagttctgc
aagattacaaggacccagcttgtcgatatcctgaataatctcaaagaaaagccagatgtt
gcaactttgttattggcgttgcaaagaacccttgaatttgaggaagaactggctgagaaa
ttcagtggaggaaccacgactgctcggaataaagagctggaaagtgatgatgaaaatgag
ggtacggaacacaataaaattgtttcagatatacggaagaaatacgagaagaaactggga
gtgcccaatgatgaagctgaacaagacaaagagaagcagaaagatttgtcagttcctggt
gctgggttcaactttcatgggattatatcatcttgttttgagccatacatggctgtgtac
atagaactagaggagaaatctctggtcgaacaattagataaacttatccaggaagaaaaa
tgggaaatcgaggaagggagtcaaacaaacattctatcaagcagcatgcaggtgttcttg
gtaattagaagaagcttaaagaggtgcagtgcattgacaaagaaccaaacattattcaac
ttgtttcaggtatttcaaagaatacttaaggcctatgcagcaaaattatatgccaggttg
ccaaaaggtggtactggcattgttgcagctgctactggtaccgacgggcagatcaggact
tctgacagggacgagaaaatgatatgttacattgtaaataccgcagaatattgtcaccaa
acgtctggtgagctagctgagaatgttgctaagataattagttctcagttttctgacaag
gtggacatgtctgacgttcaggatgaattctcagctgtgatcacaaaagcattgatgaca
cttgtgcatggcgtagaaaccaaatttgacgctgaaatggttgcaatgactcgcgttcca
tggtcgactcttgaaagtgtcggcgatcaatccgagtacgtgaatggtatcagctctatt
ttgtccagtaccgttcctgtgctgggtagcctgctttcacctacttacttccagtatttc
ctcgacaaactggctgcctcgcttggtcctcggttttatctcaatatatacaagtgcaag
cacatatcggaaactggtgcacagcagatgcttttggacactcaagcggttaagactgtt
ctattggacatcccagctcttgggaaacagactacagttgcggctagctactcaaagttt
gtaacccgggaaatgagcaaagctgaagcactcctcaaggttattttgtcaccagttgat
tctgttgctagtacctaccgtgcgctccttccagaaggcactcctcttgagtttcagcgg
atacttgagctcaagggcttgaaaaaagcagaccaacaagctatactggaagacttcaac
aagcacagccccagcatcaaacaccctaccattacccccacagccgcgccaccagttgcc
acagccacagcatcagtcccgatggcaccagtcccgctcccaacccaagccgtcgcagcg
tcaccgagcatgtccaccgccttgacgggcgctctggccaaccgggaggacgtgctcgcc
cgtgccgcagcgctcgggcgcggcgccgccacgacggggttcaagaggttcctagcattg
acagaggcggccaaagaccggaaggacgggccgttccgtaagctgttcaacgcgtaa
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