Triticum dicoccoides (wild emmer wheat): 119278209
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Entry
119278209 CDS
T07278
Name
(RefSeq) protein ESSENTIAL FOR POTEXVIRUS ACCUMULATION 1-like isoform X1
KO
K18730
PERQ amino acid-rich with GYF domain-containing protein
Organism
tdc
Triticum dicoccoides (wild emmer wheat)
Brite
KEGG Orthology (KO) [BR:
tdc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tdc03019
]
119278209
Messenger RNA biogenesis [BR:
tdc03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
119278209
Surveillance factors
Other surveillance factors
119278209
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GYF
Motif
Other DBs
NCBI-GeneID:
119278209
NCBI-ProteinID:
XP_037415461
LinkDB
All DBs
Position
3B:complement(744536670..744543249)
Genome browser
AA seq
1540 aa
AA seq
DB search
MAERKLDRFAALGKDALSLGIDEDRSTAAAMGFVDDPKDQQHLENIIPLSPQWLYAKPSD
AKISAPHGSLLEPSEKDGRMLEGSGAKKERRRNAFDAGWLDEERETSLLGRRDHKKEVDR
ELENRKNDRRSDNVSARDNNDSRAAPTSGRWDDGSTRNSGNEGRRDGKWSLRWGPDDKEK
DSKPEKKMDAEKDEPHGEKHTLPVRLLPESDSRDKWRPRHRQETQTSGTATYRAAPGFGL
EKGRVKESNVGFAPGRGRANPNSVPSFSRPSSAGPIGAPPVYGRRAATAGAFRYPRGKLL
DIYRQQKVVQSFEDGRRMLEEVPPITLSTSVKPLAFVTPDNNEEAVLEDIRKGRVTSSEA
TNTTALQKERNKDLEAFGIDANKDKSAEAFSGLSHEGSAALISEKDPFYNEGMFAGGITG
PPKKPTEENAPSHPHGLSGIREDTKFNEVKPSADIDPSTKLHDDSNAQFNVNVDYPTGQA
SYTETKAGGQDSYPEELTLYYLDPQGGVQGPFMGTDIVSWYEDGYFGLELPVRLAQAPDD
APFRPLSDLMPYLGHKPQSLPPASRGGSAESPDSVHNNFEDALPTSGSFGKSDQTSKADS
GNYAANPTRGDQEAPVQSRTGWFPSVEAQKTEANPDIRQQRIPETVTQDAEEVLYTGRPT
SGMGQSRPDFDNDRADFQLTSLDSRSGVGEANLPKQDAPRENELSPLGLLWSELEGMHPK
QPLSSNVLGINERRNPKPTAPKDIPPANIRHGPLSRMNEAPVVRDEWPANLGRLDSINDA
NMSGLISQVEPELGHLNYEEQMLLTQIRREQLQQEQMMGRNNLEFPGQFAGQVFDSLHQH
RQSINPPAPEVEHLLRVQFELEHQQRRQQLQQEQHRQQLQQEQHQRQLQQEQHQRQLQQR
QAQLLQQQQQQQQQLILEQMLQQQLQSSNFGQANMVDQVLLREQLLNDLHHQPHHFQRQH
DAAIEQLIQAKFGHGHHREQHNDMLDVLSRSNQRQALPLEQQILLGLHHDQLQTQQLANA
IRQHAGREEERHLSGGWPMDDPSQFIRTGTSPNQSHASRLGQFDLLQSLQRSSSVEHHDH
LDRSLSMHERLHRGGQGMHSLERSGSLPGGAPLSNPDVVNALARHHGLGQMETHGDLYSA
GQMPMHASGVHPQQHRLQEQLSGSHMGRLERNWSDANGQLQNSLMEASRINQLQIEAEKQ
RRNVEMNLPIDNPHAWASLMNNERNPEAELSDMIHQKLVLQAQQSRGFPDVPATASFGRK
EPSSLFAQPAADNPLRSSVDRLSFDDPLAERSHFSKMGHLGQDGPTTLDILPNNIEMNRK
LGLRSSSATMLDMQRGEFPDVMGGSASTNQLVGNANDVARRKRQGSSANLAVEDTDFSEA
VSNWVDTGIPKGSSHSLLKRTANPHAATSQATSTDLSSAIRSKKAGHASSASSDEHKMES
GVTSAAHAVEATASANKEAGLFGIPPSSNQDASGPSFSEMLKSTKKPPLQYDASESADGG
PGGKGTKKKAKKGKQIDPSLLGFKVHSNRILMGEIHRPDD
NT seq
4623 nt
NT seq
+upstream
nt +downstream
nt
atggccgagaggaagctggatcgattcgcggcgctcgggaaagatgccctctcgctcggg
atcgacgaggataggtccaccgccgccgccatgggtttcgtcgacgatcccaaagatcag
cagcacctggagaacatcattcctctgtcccctcagtggctttatgccaaaccaagcgat
gccaagatttcagcgcctcatgggtccttgcttgagccttctgagaaagatgggaggatg
cttgaaggctctggggctaagaaagagcgccgccggaatgcatttgatgctggttggctt
gatgaggagagggagacgagcttacttgggaggagggatcacaagaaggaagtggaccgg
gaactggagaaccgtaaaaacgatcgccgatctgacaatgtttctgcaagggacaacaac
gattcacgggcagctcctacatctggaaggtgggatgatggctccacccgaaattcaggg
aatgaaggtaggcgtgatggaaaatggtcattaagatggggacctgacgacaaggagaag
gactcgaaaccagaaaagaagatggatgcagaaaaggatgaacctcatggtgagaaacat
acacttcctgtaaggctgctacctgagtcagactcccgtgataaatggagacctcgtcac
cggcaggagactcagaccagtggtaccgcgacataccgtgctgctccaggatttggattg
gagaaaggacgtgtgaaggaatcgaatgttggttttgcccctggaagaggcagggcaaac
cccaactcagttccatccttcagccgtccatcatctgctgggccaattggtgctccacct
gtgtatgggaggcgtgcggcaactgctggtgcttttcgctacccaaggggtaaacttctt
gacatatacaggcaacaaaaggttgtgcagtcatttgaagatggccgacggatgctggaa
gaagttcctcccataacactctctacttctgttaagccactagcctttgtcacccctgat
aacaatgaagaggctgttttggaagatattaggaaaggcagggtcaccagcagtgaagcg
acgaatacaactgcactccaaaaggagagaaacaaagatcttgaagcttttggtattgat
gccaacaaggataaaagtgctgaagcatttagcgggttaagtcatgaaggatctgctgcc
ttgatatcagagaaggaccccttctacaatgaagggatgttcgcaggtggtattacaggc
ccaccaaagaagcctaccgaggaaaatgctcccagtcacccacatggactttctggcatc
agggaagacacaaagtttaatgaggtcaagccaagtgctgatatcgatcctagcactaag
ttacatgatgattcaaatgctcagttcaatgtaaatgttgactatcctactggccaggct
agttacactgaaacaaaagctggtggccaggatagttacccagaggagttgaccctatac
tatctggatccccaaggaggtgtgcagggtccatttatgggtactgatatagtctcctgg
tatgaagatggatatttcggattggagctacctgtgcgtctagctcaggctccagatgat
gctccatttcgcccactatctgacctcatgccgtaccttggacataagccccaatctctc
ccacctgcatcccgtggtggaagtgctgaatctccggattctgtacataacaattttgaa
gatgcgcttcctacttctggttcttttgggaagagtgatcagacatctaaggcagactct
ggaaattatgcagccaatcctacaagaggtgaccaggaagcaccggtacaatcacgtact
ggttggttcccctcagttgaagcacaaaagactgaagcaaacccagatattcgtcagcag
cgcattcctgaaactgtgactcaggatgctgaagaagtgttgtacaccgggaggcctacc
agtggcatgggtcaatctcgaccagattttgataatgaccgtgcagatttccaattgaca
tcactggattcccgttctggggtgggggaagctaatttgcccaagcaggatgcccctaga
gagaatgaactcagccctcttggtttgctttggtctgagctggaagggatgcatccaaag
cagcctctctcatcaaatgtgcttggtataaatgagcggaggaatcccaaaccgacagct
cccaaggacattccacctgcaaatatcaggcatgggccgcttagccggatgaatgaagcc
cctgttgtgcgtgatgagtggcctgctaaccttggacggctggacagcatcaatgatgcc
aacatgtcagggctaatttcccaggttgaacctgagctaggtcatctgaattatgaggag
caaatgctacttacacagattcgaagggagcaactgcagcaggaacaaatgatgggtcgt
aacaatctggaatttcctggacaatttgcagggcaggtgtttgattcattgcaccaacac
agacagtccatcaatccaccggctcctgaggtggagcaccttttgagagtccagtttgaa
cttgaacaccagcagcgacgccaacagcttcagcaggagcagcaccgccagcagcttcag
caagagcagcaccagaggcagcttcagcaggagcaacaccaaaggcagctgcagcagcgc
caagcccagctgctgcaacagcaacagcagcaacaacagcagctgattcttgaacaaatg
ttgcagcagcagttgcagagttcaaacttcggacaagctaacatggtcgatcaagtgtta
ctccgggaacagttattgaatgacttgcatcatcaaccccatcattttcaaaggcagcat
gatgcagctattgaacaactcattcaagcaaaatttgggcatggccatcatagggagcaa
cacaatgatatgttagatgttctctcacgttcaaaccagaggcaggcgcttcctttggag
cagcaaattcttttagggctgcaccatgatcagctccaaacacaacaattggccaatgct
ataagacaacatgcgggcagggaggaagaacggcatttaagtggtggctggccaatggat
gatcctagccaatttatccgcacaggaactagtccaaatcaaagccatgcctccagactt
ggtcaatttgatcttctgcagtcccttcagaggtcgtcatctgtggagcatcatgaccat
ctcgatcgaagcctatctatgcatgaacgattgcataggggaggtcaaggtatgcactcc
cttgagcggtctggctctttgcctggtggtgctcctttatcaaatcctgatgttgtaaat
gccctagcacgtcatcatggccttggtcagatggaaacacatggtgatctatattctgca
ggccagatgcctatgcatgcttcaggggttcatccccagcaacacaggctgcaggagcag
ctgtcaggttctcacatgggaaggctggaaaggaactggtcagatgccaatgggcaattg
caaaatagcctgatggaagcttcacgcatcaaccagttgcaaattgaagcagagaagcag
aggaggaatgtggaaatgaaccttcccatagacaacccacatgcatgggcatcccttatg
aacaatgagaggaacccagaagctgaattgagtgatatgattcatcaaaaactggttctt
caagcacagcaatctcgtggtttccctgatgttccggcgacggcatcatttggacgtaaa
gagccttcttcactctttgcacagcctgctgcagataaccctttaagatcatctgttgac
aggttgtcttttgatgatccacttgcagaaaggtcacatttctcaaaaatggggcacttg
ggacaggatggaccaactactctagatattttaccgaacaatattgagatgaaccggaaa
ctcggccttagatcaagctctgcgacaatgcttgatatgcaaaggggagaattcccagat
gtgatgggcggcagtgcatcaactaatcaattggttgggaatgccaatgatgtagccagg
aggaaaaggcagggttctagtgcaaacttggcagtggaggacactgatttttctgaagcg
gtcagcaactgggttgatactggcatcccaaagggaagctcccattccctgttaaagcgc
acagcaaacccacacgctgctacctcgcaggcaacgtcaacggatctgtcttcagccatt
aggtccaagaaggcaggccatgcttcttctgcatcttctgatgagcataagatggaatct
ggagtcacctcagcagcccacgccgttgaagccactgcttcagccaacaaagaggcaggg
ttgttcggcatcccaccgagcagcaatcaggacgcctctggtccttcgttcagtgaaatg
ctcaagagcacaaagaagccccccttgcagtatgacgcctctgaatccgccgacggtggc
cctggcggcaagggcactaagaagaaagcaaagaaaggaaagcagatcgacccttcgctt
ctgggcttcaaggtccacagcaaccgcatcttgatgggcgagatccaccgccccgacgac
taa
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integrated database retrieval system
