Triticum dicoccoides (wild emmer wheat): 119278976
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Entry
119278976 CDS
T07278
Name
(RefSeq) probable dual-specificity RNA methyltransferase RlmN
KO
K06941
23S rRNA (adenine2503-C2)-methyltransferase [EC:
2.1.1.192
]
Organism
tdc
Triticum dicoccoides (wild emmer wheat)
Brite
KEGG Orthology (KO) [BR:
tdc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
tdc03009
]
119278976
Enzymes [BR:
tdc01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.192 23S rRNA (adenine2503-C2)-methyltransferase
119278976
Ribosome biogenesis [BR:
tdc03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
119278976
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Gene cluster
GFIT
Motif
Pfam:
Radical_SAM
RlmN_N
Fer4_12
Radical_SAM_2
Motif
Other DBs
NCBI-GeneID:
119278976
NCBI-ProteinID:
XP_037416276
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Position
3B:complement(856518804..856521456)
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AA seq
407 aa
AA seq
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MAAPQQVRAVPLARALRLRTRASAAPAAAPETSRRALLGLTEPELRQLAVDLGQQSYRGK
QLHDLVYKNRAKQVEEFAYVPKVFREALVGAGWNVGRSPVHHAVTATDGTTKILLKLEDN
RLVETVGIPVDDRGTPRLTACVSSQVGCPLRCSFCATGKGGFARNLKGHEIVEQVLAIEE
SFKHRVTNVVFMGMGEPMLNLKAVLEAHQCLNKELKIGQRMMTISTVGVPNTISKLASHK
LQSTLAVSLHAPNQRLRETIVPSAKAYPLEALMDDCKNYFLETGRRVSFEYTLLAGINDE
KAHAEELAALLHACGGGYHVNLIPYNPVEGSEYKRPYRKAIQAFVDALESRKITVSVRQT
RGLDANAACGQLRNEFQKNPLLESSPPSEPNQLLESSTPSEPSLVPA
NT seq
1224 nt
NT seq
+upstream
nt +downstream
nt
atggccgcgccgcagcaggtccgcgccgtgcccctggcgcgtgcgctccgcctccgcacg
cgcgcctccgccgcccccgccgccgcgccggagacgtcccgccgcgcgctcctcggcctc
acggagcccgagctccgccagctcgccgtcgacctcggccagcaaagctaccgggggaag
cagctgcacgacctcgtctacaagaacagggccaagcaggtggaggagttcgcctacgtg
ccaaaggtgttccgggaggcgctggtcggcgcgggatggaacgtgggccggtcgccggtg
caccacgccgtcacggccaccgatggcaccaccaagatacttctcaagctggaggacaac
agactggtggagacggtggggatccccgttgacgacaggggcacgcctagactcacagcc
tgcgtttcatcgcaggttggctgccccttgcgttgctcgttctgtgccactgggaaggga
gggtttgcgagaaacctcaaggggcacgagattgtcgagcaggtattggccatagaggag
tcgttcaaacacagggtgacaaatgtagttttcatgggtatgggtgagcccatgctgaac
ctcaaagcagttctggaggctcaccaatgcttgaataaggaactaaagattgggcaaagg
atgatgacaatctcaacagtaggtgttcccaacacgataagtaagctagcatcccacaag
cttcagtcgacactggcagtcagcctgcatgccccaaatcagaggctgcgcgaaacaatt
gttccaagtgcaaaggcatatcctctggaagcactaatggatgattgcaagaattatttc
ctcgaaactggacgcagggtatccttcgagtacactctgctagctgggattaacgatgaa
aaggcgcacgctgaagaacttgcagcgctgctgcatgcatgtggaggtggttatcacgtg
aacttgattccctataacccggtagaaggatctgagtacaagaggccgtacagaaaagcg
attcaagcgtttgttgatgcactggaatctcggaagatcacagtcagcgttcgacagacc
cgtgggcttgacgctaatgcggcttgtgggcagctcaggaatgagttccagaagaatcct
ctgctcgagtcgtccccaccctctgagcccaaccaactgctcgagtcgtctacgccctcg
gagcccagccttgttcccgcttag
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