Triticum dicoccoides (wild emmer wheat): 119279813
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Entry
119279813 CDS
T07278
Name
(RefSeq) polygalacturonase-like
KO
K01184
polygalacturonase [EC:
3.2.1.15
]
Organism
tdc
Triticum dicoccoides (wild emmer wheat)
Pathway
tdc00040
Pentose and glucuronate interconversions
tdc01100
Metabolic pathways
Module
tdc_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
tdc00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
119279813
Enzymes [BR:
tdc01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.15 endo-polygalacturonase
119279813
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Motif
Pfam:
Glyco_hydro_28
Pect-lyase_RHGA_epim
Beta_helix
Motif
Other DBs
NCBI-GeneID:
119279813
NCBI-ProteinID:
XP_037416818
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Position
3B:complement(692858522..692860275)
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AA seq
406 aa
AA seq
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MLGLLAHLHAALLFLPNNGGPAWAGPGGGVGAVYDVMRYGARPDGMTDATLPFLRAWADA
CRSPRPATVLVPPGMFLVGSATFMGPCATRAVTFNVAGTLLAPSGYGWDSASPGRWLTFE
SVEGLAVSGGTLDGRGAPLWACKQQQPQQPRLHCPSGASSLTISNSRDVVVDGLRSMNSE
LFHVVVLQSNGVTLNRVTVDAPEDSPNTDGIHIHMSSHVSVYDANIRTGDDCVSVGPGNS
NLWIERVACGPGHGISIGSLGHQQGLDMEDVQNVTVKTTWFTGTSNGLRIKTWGSSKQGF
VRGVTFEDATMTGVHNPIIIDQNYCPAKVGCSDRSSSIKISEVKYVDIRGWSTTPVAVTF
NCSRSHPCSGISMQDVKLMYDRRVAKSSCRNVQGRSVGLVLPPSCL
NT seq
1221 nt
NT seq
+upstream
nt +downstream
nt
atgctgggcctgctcgcgcacctccacgcggcgctcctgttcctccccaacaacggcggc
ccggcctgggccgggccaggcggcggcgttggggcggtgtacgacgtgatgcgctacggc
gcccgcccggacggcatgacggacgcgacgctgccgttcctgcgcgcgtgggccgacgcg
tgccgctcgccgcgcccggccacggtgctggtgcccccgggcatgttcctggtggggagc
gccacgttcatgggcccgtgcgccacccgcgccgtcacgttcaacgtggccggcacgctg
ctcgccccctcgggctacggctgggacagcgcctcccccgggcggtggctcacgttcgag
tccgtggagggcctcgccgtctccggcggcaccctcgacggccgcggcgcccccctctgg
gcctgcaagcagcagcagccgcagcagccgcgcctccactgcccgtccggcgcctcgtcg
ctgacgatctcgaactcgagggacgtggtggtagacgggctgaggtccatgaacagcgag
ctgttccacgtggtggtgctgcagagcaacggcgtgacgctgaaccgggtcacggtggat
gcgccggaggacagccccaacaccgacgggatacacatccacatgtccagccacgtctcc
gtgtacgacgccaacatccgcaccggcgacgactgcgtttccgtcggcccgggcaactcc
aacctctggatcgagcgtgtcgcctgcggcccaggccacggcataagcatcggaagcttg
gggcatcagcaagggctggacatggaggacgtgcagaacgtgacggtgaagacgacgtgg
ttcaccggcacctcaaacgggctgagaatcaaaacctgggggagctccaagcagggtttc
gtgaggggtgtcaccttcgaggacgctactatgaccggcgtccacaaccccatcatcatc
gatcaaaattactgtcccgcaaaagttgggtgcagcgaccggagttcgagtatcaagatc
agcgaggtgaagtacgtggacatacgggggtggtcgacgacgccggtggccgtgaccttc
aactgcagcaggagccacccgtgcagcgggatcagcatgcaggacgtgaagttgatgtac
gacaggcgcgtcgccaaatcctcctgccggaacgttcaggggagatcggttggtctcgtc
ctgcccccaagctgcctctga
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