Triticum dicoccoides (wild emmer wheat): 119280222
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Entry
119280222 CDS
T07278
Name
(RefSeq) F-box protein SKP2A-like
KO
K03875
F-box and leucine-rich repeat protein 1 (S-phase kinase-associated protein 2)
Organism
tdc
Triticum dicoccoides (wild emmer wheat)
Pathway
tdc04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
tdc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
119280222
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
tdc04121
]
119280222
Ubiquitin system [BR:
tdc04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
119280222
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GFIT
Motif
Pfam:
DUF7885
LRR_6
LRR_At5g56370
LRR_4
LRR_Zer-1
F-box-like
LRR_At1g61320_AtMIF1
Colipase-like
Motif
Other DBs
NCBI-GeneID:
119280222
NCBI-ProteinID:
XP_037417046
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Position
1A:474457300..474461727
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AA seq
379 aa
AA seq
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MVSARSVDRQLDACFSNLMVSSGGGRGQAETGGAMPMLSGWKDLPMELLMRIISVAGDDR
IVVVASGVCTGWRDALGWGVTNLSLSWCQQNMNNLTISFAHKFTKLQVLTLRQIKPQLED
SAVEAVANYCYDLRELDLSRSFRLSDRSLYALANGCPRLTKLNISGCSSFSDSALIYLSC
HCKNLKSLNLCGCGKAATDESLQAIAQNCGHLQTLNLGWCDNVTDEGVTSLASGCPDLRA
LDLCGCVLITDESVIALASGCPYLRSLGLYYCQNITDRAMYSLANSCVKSKRGRWGTPRS
SSSSSKDVDGLANLNISQCTALTPPAVQAVCDSFPSLHTCPERHSLIISGCLSLTNVHCA
CGLQRHRAGSALQATSHAY
NT seq
1140 nt
NT seq
+upstream
nt +downstream
nt
atggtcagtgcgaggtcagtagacaggcagttggatgcgtgcttcagcaacctcatggtg
tctagcggtggtggaagggggcaggctgaaactggtggcgctatgcctatgttgtcagga
tggaaggaccttccaatggagctgcttatgcggatcatatcagttgctggagatgatcga
attgtcgttgtggcatccggtgtttgcactggctggcgcgacgcgttaggatggggggtc
actaatctttccctctcatggtgccagcagaacatgaataacttaacaatatcatttgct
cacaagttcacaaagcttcaggttctcactcttcgccaaatcaaacctcagcttgaagac
agtgcagtagaggctgttgccaactactgttatgatctacgtgagttagacctcagccga
agtttccggcttagtgaccgttcattgtatgcactggccaacggatgtcctcggcttaca
aaactgaacatcagtgggtgttccagtttcagtgacagtgccttaatctaccttagttgc
cactgtaaaaacctgaagagcttgaatctttgtggatgtggaaaggcagccactgatgaa
tccttgcaggccatagcccaaaactgtgggcacctgcaaactttaaacctaggttggtgt
gacaatgtcacagatgagggggttaccagcttggcatcaggttgccctgatctcagggcc
ctggatttgtgtggctgtgttcttataacagacgagagtgttattgctctagcaagcggg
tgcccgtacctgcgatctttgggcctgtactactgccagaacatcaccgaccgtgccatg
tactccctcgcaaacagctgcgtgaagagcaaacgagggaggtggggcaccccgcggagc
agcagcagcagctcgaaggacgtcgatgggctggcaaacctgaacatcagccagtgcacg
gccctgacgccccccgcggttcaggcggtgtgcgactccttcccgtcgctccacacctgc
ccggagaggcactccctcatcatcagcggctgcctcagcctgactaacgtccactgtgcc
tgcggcctccagcgccaccgcgccggaagcgccctgcaggccaccagccatgcgtactga
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