Triticum dicoccoides (wild emmer wheat): 119280237
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Entry
119280237 CDS
T07278
Name
(RefSeq) polygalacturonase-like
KO
K01184
polygalacturonase [EC:
3.2.1.15
]
Organism
tdc
Triticum dicoccoides (wild emmer wheat)
Pathway
tdc00040
Pentose and glucuronate interconversions
tdc01100
Metabolic pathways
Module
tdc_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
tdc00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
119280237
Enzymes [BR:
tdc01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.15 endo-polygalacturonase
119280237
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Motif
Pfam:
Glyco_hydro_28
Beta_helix
Motif
Other DBs
NCBI-GeneID:
119280237
NCBI-ProteinID:
XP_037417051
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Position
3B:complement(838355204..838356694)
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AA seq
279 aa
AA seq
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MNGDSVARVDGGGTAAEANAAAAEEAETLDISQSKGVSVKQLTLLDSKEFHMSIFDCSGV
TVQGVRIIAPSNSPNTDGIQVSHSRHVSILNTTIGTGDDCISLGPGTSDMLIRDIKCGPG
HSISIGSLGWQDGEEGVRNLTVDRAVLKGTTNGLRIKTWAMPNSGFVKNVSFLRVTMNRV
ANPILVDQNYCSRKGDCPGNSSGVQISDLSYTDIKGSSATPVAVKFNCSGTNPCSGIKLR
NIRLRYRHQRPAQAKCQNAGGSASGEMANLGVKSDGSNL
NT seq
840 nt
NT seq
+upstream
nt +downstream
nt
atgaacggcgattccgtcgccagggttgacggaggcggcacggcggcggaggccaacgcg
gcggcggcagaggaagcggaaacacttgacattagccaatccaagggcgtgagcgtgaag
cagctgacgctgctcgacagcaaggaattccacatgtccatcttcgactgcagcggtgtg
acggtccaaggcgtccggatcatcgcgccgtctaacagccccaacaccgacggcatccag
gtcagccactcccggcacgtgagcatcctcaacaccaccatcggcaccggcgacgactgc
atctccttggggcccggcacctcggacatgctcatcagggacatcaagtgcggtccgggc
cacagcatcagcatcgggagcctgggatggcaggacggtgaggagggggtgagaaacctg
accgtggacagggcggtgctgaagggcacgaccaacggcctgcggatcaagacgtgggcg
atgcccaactccggcttcgtcaagaacgtctccttcttgcgggtcaccatgaaccgcgtg
gccaaccccatcctcgtcgaccagaactactgctcccgcaagggcgactgcccgggcaat
agctcgggggtgcagatcagcgacctgtcgtacacggacatcaagggctcgtcggcgacg
cccgtggcggtgaagttcaactgcagcggcaccaacccctgcagcgggatcaagctcagg
aacatcaggctgaggtaccggcaccagcggccggcgcaggccaagtgccaaaacgccggc
gggtccgcgtccggagagatggcgaatcttggtgtaaaatccgatggttctaatttgtga
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