Triticum dicoccoides (wild emmer wheat): 119280484
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Entry
119280484 CDS
T07278
Name
(RefSeq) putative E3 ubiquitin-protein ligase SINA-like 9
KO
K04506
E3 ubiquitin-protein ligase SIAH1 [EC:
2.3.2.27
]
Organism
tdc
Triticum dicoccoides (wild emmer wheat)
Pathway
tdc04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
tdc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
119280484
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
tdc04121
]
119280484
Enzymes [BR:
tdc01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
119280484
Ubiquitin system [BR:
tdc04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
SINA (Seven in absentia) proteins
119280484
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
Sina_ZnF
Sina_RING
Motif
Other DBs
NCBI-GeneID:
119280484
NCBI-ProteinID:
XP_037417213
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Position
3B:11157979..11160270
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AA seq
272 aa
AA seq
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MDKKAGAERASAEENCSGKKAKVTVEAEAAVSAITLNVNPKLLECSGCCSPLVPPIFQCT
NGHITCLKCCADLKHSSCGLCALERTGCHAWGRILGGLTMPCSFQGHGCTETIRFTEKLA
HEESCLHAPCHCPIAGCHPYHGRSLRDHINLEHATIQYTRVTARSLYPLSMRNDEPARLV
SLGSRAVFLLVVDRSIPSGRALSLIHLVSDPIEKEDFKYKIEVHTRIGILSVSGSETPSV
GRLMRTHQAGALLFVSDAVWSPQDSPVYLELK
NT seq
819 nt
NT seq
+upstream
nt +downstream
nt
atggacaagaaggctggtgcggaaagggcctcggcggaggagaactgctccgggaagaag
gctaaggtcacggtggaggccgaggctgcggtgtccgcgatcactctcaacgtaaacccc
aagttgctggagtgctctggttgttgcagcccgttggttccaccaatttttcagtgcaca
aatggccatatcacatgcttaaagtgctgcgccgatctgaagcacagtagttgcggcttg
tgtgccttggagcgcaccggctgccacgcctgggggcgcatcctcggcggcctcaccatg
ccgtgctcgttccaggggcacgggtgtaccgagacgatccggttcacggagaagctggcc
catgaagagtcctgcctccacgccccatgccactgccccatcgctggctgccacccctac
catggccggtccctgcgcgaccacatcaacttggagcacgctaccatccagtacacccgc
gtcacagccagaagcctctaccccctgagcatgcgcaacgacgagccagcccgcctggtg
tccctaggcagcagggcggtgtttctccttgtggtcgaccggagcatcccgtcggggcgt
gcgctgtcgttgatccaccttgtgagtgacccgatcgaaaaggaggatttcaagtacaag
atcgaagtgcatacgcggattggcattctctctgtgtccggcagcgagacaccgagcgtc
gggcggctgatgaggacgcaccaggcaggtgcgttgctgttcgtatcagacgccgtgtgg
tctccccaggattctcccgtgtacctcgagctgaaatga
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