Triticum dicoccoides (wild emmer wheat): 119280496
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Entry
119280496 CDS
T07278
Name
(RefSeq) E3 ubiquitin-protein ligase SINA-like 2
KO
K04506
E3 ubiquitin-protein ligase SIAH1 [EC:
2.3.2.27
]
Organism
tdc
Triticum dicoccoides (wild emmer wheat)
Pathway
tdc04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
tdc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
119280496
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
tdc04121
]
119280496
Enzymes [BR:
tdc01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
119280496
Ubiquitin system [BR:
tdc04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
SINA (Seven in absentia) proteins
119280496
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sina_ZnF
Sina_RING
zf-RING_6
Motif
Other DBs
NCBI-GeneID:
119280496
NCBI-ProteinID:
XP_037417224
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Position
3B:12574869..12577137
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AA seq
275 aa
AA seq
DB search
MAKKAGAERAAAAESCARKKARVESEARAAASKITVNLDHKLLECSACCSPLAPPLFQCT
NGHIACSECRTNAEYSCSLCAEPANTRCDIMERVLGGMTVPCSFREFGCSATIPFTKKLT
HEESCLHAPCHCPIPYCRLYANSGRSLREHIETKHCLVPYGDARAGSLSPVRVCDSEPVR
LVFLDARAVFLLVVERSGPSGRAVSVVQLVSEPVKEEEKDFKYKIQVHTRAGVLSLSGET
QSVGRLMRPYQAAASLFVSDDVWSPRDSPVYLELE
NT seq
828 nt
NT seq
+upstream
nt +downstream
nt
atggccaagaaggctggtgcggagagggctgcggcggcggagagctgcgcccgaaagaag
gctagggtcgagtccgaggccagggctgctgcgtcgaagatcaccgtcaacttagaccac
aagttgctggagtgctccgcgtgctgcagcccattggctccaccccttttccagtgcaca
aatggccatatcgcatgctcagagtgccgcaccaatgcggagtacagttgcagcttgtgt
gccgagcccgccaacacccgctgcgacatcatggagcgcgtacttggcggcatgaccgtg
ccgtgctcgttccgggagttcggctgctccgcgacgatcccgttcacaaagaagctgacc
catgaagaatcctgcctccatgccccgtgccactgccctataccctactgccgcctctat
gccaacagtggtcggtccctgcgtgagcacatcgagacgaagcactgcttggttccatac
ggcgatgccagagctggcagcctttcccccgtgagggtgtgcgacagtgagcctgtgcgc
ctggtgttcctggacgccagggcggtgttcctgctggtggtcgagcggagcgggccatcg
gggcgtgccgtgtcggtggtccagctcgtcagcgagccggtcaaggaggaggagaaggat
ttcaagtataagatccaggtgcatacgcgagcaggcgtcctctctctgtccggcgagacg
cagagcgtcgggcggctgatgaggccttaccaggcagccgcgtcgctgttcgtctccgat
gacgtgtggtctccccgggattctcccgtgtacctcgagctggaatga
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