Triticum dicoccoides (wild emmer wheat): 119280623
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Entry
119280623 CDS
T07278
Name
(RefSeq) putative E3 ubiquitin-protein ligase SINA-like 6
KO
K04506
E3 ubiquitin-protein ligase SIAH1 [EC:
2.3.2.27
]
Organism
tdc
Triticum dicoccoides (wild emmer wheat)
Pathway
tdc04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
tdc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
119280623
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
tdc04121
]
119280623
Enzymes [BR:
tdc01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
119280623
Ubiquitin system [BR:
tdc04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
SINA (Seven in absentia) proteins
119280623
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sina_ZnF
Sina_RING
bCoV_viroporin
Motif
Other DBs
NCBI-GeneID:
119280623
NCBI-ProteinID:
XP_037417314
LinkDB
All DBs
Position
3B:30876646..30880946
Genome browser
AA seq
319 aa
AA seq
DB search
MSTHGIESMEAKRMRGEKSATREGAIPLEVLDCAFCFDPLRPPVFQNVEVSPLGIGDILF
LPSKGDNMRHLSSQTVLQVILSNFSKMSSCKCRVGHVICSSCHHKLRKKDNCHVCAITGG
YNRCIAFDHILESIKVSCSNSIYGCTVKTHYYHQEEHKKSCPHAPCFCPEPGCGFAGSTT
QLQRHLTVDHMLPATAFAYGYSFTLHMQEGMRVLHRKEEGGPLFLAKFTLVPPFGNAVSI
LCIVPHAVTENHRFECDVDFYSRTMGWHQHSNFQIISTNLSNGFPGEEASYTFVVPDISS
DPHTTTTRLLIRPPKISCP
NT seq
960 nt
NT seq
+upstream
nt +downstream
nt
atgagcacacacgggattgagagtatggaggcgaagaggatgaggggggagaagtccgcc
accagggaaggcgccatccctctagaggtgctagactgtgccttctgcttcgatcccctc
agacctcccgtctttcagaatgttgaagtgagtccattagggataggagatatattattt
ctcccttctaagggcgacaatatgaggcatttatcctcacaaacagtgttgcaagtcatc
ctatccaatttctcaaaaatgagttcctgcaaatgtagggtcgggcatgtgatatgttcc
tcttgccatcacaagctccggaagaaggacaattgccatgtgtgcgccattaccggaggc
tacaatcgctgcatcgccttcgaccacatcctcgagtctattaaggtctcttgctccaac
tctatctatgggtgcaccgtcaagacacactactaccaccaagaggaacacaagaaatca
tgtccgcatgcgccgtgcttctgccccgagcccggttgcggcttcgcaggctcaaccacc
caactccagcgccatctaactgtcgatcacatgttgcccgccactgcgttcgcgtatgga
tattctttcacccttcatatgcaggaaggaatgcgtgtactccacaggaaagaagaaggt
ggaccccttttcctagcaaagttcacgttggtgccgcctttcggcaatgctgtctccatc
ttgtgcattgttcctcatgctgtgacggagaatcataggttcgagtgtgatgttgatttc
tacagccgcaccatgggatggcaccaacattcaaatttccagatcataagcacgaatctc
tccaacgggttcccaggggaggaggccagctatacatttgttgtaccagatatttcttcc
gacccgcacaccaccaccacccgcctcctcattcgccccccaaagatatcctgtccctaa
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