Triticum dicoccoides (wild emmer wheat): 119281113
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Entry
119281113 CDS
T07278
Name
(RefSeq) cell division control protein 48 homolog D-like
KO
K13525
transitional endoplasmic reticulum ATPase
Organism
tdc
Triticum dicoccoides (wild emmer wheat)
Pathway
tdc04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
tdc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
119281113
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tdc03019
]
119281113
03009 Ribosome biogenesis [BR:
tdc03009
]
119281113
04131 Membrane trafficking [BR:
tdc04131
]
119281113
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
tdc04147
]
119281113
Messenger RNA biogenesis [BR:
tdc03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
119281113
Ribosome biogenesis [BR:
tdc03009
]
Eukaryotic type
Pre-60S particles
Ribosome quality control proteins
119281113
Membrane trafficking [BR:
tdc04131
]
SNARE
SNARE associated proteins
Others
119281113
Autophagy
Aggrephagy
Other aggrephagy associated proteins
119281113
Exosome [BR:
tdc04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
119281113
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
AAA_lid_3
CDC48_N
RuvB_N
AAA_16
AAA_33
AAA_5
AAA_2
CDC48_2
AAA_14
AAA_22
TIP49
NPHP3_N
RNA_helicase
AAA_17
nSTAND3
Mg_chelatase
AAA_28
Parvo_NS1
AAA_18
ABC_tran
ATPase_2
IstB_IS21
AAA_7
Viral_helicase1
NB-ARC
ResIII
AAA_24
TsaE
Vps4_C
Zeta_toxin
NACHT
DUF815
Sigma54_activ_2
Zot
Molydop_binding
Motif
Other DBs
NCBI-GeneID:
119281113
NCBI-ProteinID:
XP_037417635
LinkDB
All DBs
Position
3B:186964321..186966687
Genome browser
AA seq
788 aa
AA seq
DB search
MATAATSKKAANRLVVEEATTNDDNSVCNLHPDTMEKLSIYKGDIVLLKGKRRHNTVCMA
LPDDTCEGHKLRINKVARSNLRVRIADVVSVHLCHDAKFGKRVHILPLDDTVEGITGNLF
DAYLKPYFVDAFRPVHKGDLFLVRGGMRSVEFKVMEIDPAADYCIVAPDTEIFCEGEPVK
REDEERLDDVGYDDVGGMGKPLTLIRELVELPLRHPQLFKSIGVKPPKGILLYGPPGSGK
TLIARAVANETGAFFFLINGPEIMSKMAGESESNLRKAFEEAEKNAPSIIFIDEIDSIAP
NREKTHGEVERRIVSQLLTLMDGMKARAHVIVMGATNRPNSIDPALRRFGRFDREIDIGV
PDEVGRLEVLRIHTKNMKLDKDVNLQVIAKDTHGYVGADLAALCTEAALQCIREKMDVID
LEDDTIDAEILNSMAVTNGHLKTALVGTNPSALRETVVEVPNVSWTDIGGLDGVKRELQE
TVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELLTMW
FGESEANVREIFDKARQSAPCVLFFDELNSIATQRGGRVGDAGGAADRVLNQLLTEMDGM
NAKKTVFIIGATNRPDIIDSALLRPGRLDQLIYIPLPDEASRHQIFKACLRKSPVAKDVD
LGALARFTAGFSGADITEICQRACKYAIREDIEKDMERQRMGKDTMEVDGGREDEVAQIK
AVHFEESMKHARRSVSDADIRKYQAFAQTLQQSRGFGTEFRFPAQPHAAEAAVHTSAAAD
EDEDDLYK
NT seq
2367 nt
NT seq
+upstream
nt +downstream
nt
atggcgaccgcggcgacgtcgaagaaggcggcgaaccggctggtggtggaggaggccacc
accaacgacgacaactccgtgtgcaatctccaccccgacaccatggagaagctctccata
tacaaaggtgacatcgtgctgctcaagggcaaacgccgccacaacacggtctgcatggca
ctgcccgacgacacctgcgaggggcacaagctcaggatcaacaaggtggcccgctccaac
ctgcgcgtgcgcatcgccgacgtcgtgtccgtgcacctgtgccacgacgccaagttcggc
aagcgcgtgcacatcctccctctggacgacaccgtcgagggcatcacgggcaacctcttc
gacgcctacctcaagccctacttcgtggacgccttccgcccggtccacaagggcgacctc
ttcctcgtgcgcggcggcatgcggagcgtcgagttcaaggtcatggagatcgaccccgcg
gcggactactgcatcgtggcgcccgacacggagatattctgcgagggcgagcccgtcaag
cgggaggacgaggagaggctggacgatgtcggctacgacgacgtgggtggcatggggaaa
ccgttgactctgatcagagagctcgtcgagttgccactcaggcatccgcagcttttcaag
tccattggcgtcaagcctcccaagggcatcctcctctacggccctcccgggtcgggcaag
actctgatcgcccgtgcggtggccaacgagaccggggccttcttcttcctcatcaacggc
ccggagataatgtccaagatggccggagagagcgagagcaacctgaggaaggccttcgag
gaggccgagaagaacgcgccctccatcatcttcatcgacgagatcgactccattgcgcct
aacagggagaagactcacggcgaggtcgagaggcgcatcgtctcccagctgctgacgctc
atggacggcatgaaggcccgcgcgcacgtcatcgtcatgggtgccacgaaccgtcccaac
agcatcgaccctgccttgaggcgcttcgggaggttcgatcgcgagatcgacatcggcgtg
ccggacgaggtcgggcgtctcgaagtgctccgcatccacacaaaaaacatgaagctggac
aaggacgtcaacctacaggtgattgccaaggatacgcacggctacgtcggtgccgacttg
gccgcgctctgcaccgaggcggcgctgcagtgtatcagggagaagatggacgtgattgac
ttagaggacgacaccattgatgccgagatcttgaactccatggccgtcacaaatggccac
cttaagacggctctcgtgggcacgaacccgtccgcgcttcgtgagaccgttgtcgaggtg
cccaacgtcagctggaccgatatcggtggcctcgacggcgtcaagagggagctacaagag
accgtccagtacccggtcgagcacccagagaaattcgagaagttcggcatgtcgccgtcc
aagggcgtcctcttctacgggccaccaggatgcggcaagaccttgctggcgaaggccatc
gccaatgagtgccaggccaacttcatcagcattaaggggccagagctgctcactatgtgg
ttcggcgagagcgaggccaacgtgcgcgagatcttcgacaaggcgcgtcagtctgcgccg
tgcgtgctgttcttcgacgagctcaactccatcgcgacccagaggggcggcagggtgggc
gacgccggcggtgcggcggacagggtcctgaaccagctgctcaccgagatggacggcatg
aacgccaagaagacggtgttcatcatcggcgccaccaataggccggacattattgactcg
gcgttgctccgtcccggccgcctcgaccagctcatctacatcccattgccggacgaggcc
tcgcggcaccagattttcaaggcctgcctcaggaagtctcccgtggccaaggacgtcgac
ctcggcgcgcttgcaaggttcaccgccggctttagcggtgccgacatcacggagatctgc
cagcgggcgtgcaagtacgccatcagggaggacattgaaaaggacatggagaggcagagg
atggggaaagacaccatggaggtggacggcgggcgggaagacgaggtggctcagattaag
gcggttcacttcgaggagtcaatgaagcatgcgaggaggagcgtgagcgacgccgacatc
aggaagtaccaggccttcgcgcagacgctgcaacagtctagggggttcggcaccgagttc
cgcttcccggcgcagccacacgcggcagaagctgctgtccacacctccgcggcagctgat
gaggatgaagacgatctgtacaagtga
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