Triticum dicoccoides (wild emmer wheat): 119281117
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Entry
119281117 CDS
T07278
Name
(RefSeq) cell division control protein 48 homolog D-like
KO
K13525
transitional endoplasmic reticulum ATPase
Organism
tdc
Triticum dicoccoides (wild emmer wheat)
Pathway
tdc04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
tdc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
119281117
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tdc03019
]
119281117
03009 Ribosome biogenesis [BR:
tdc03009
]
119281117
04131 Membrane trafficking [BR:
tdc04131
]
119281117
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
tdc04147
]
119281117
Messenger RNA biogenesis [BR:
tdc03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
119281117
Ribosome biogenesis [BR:
tdc03009
]
Eukaryotic type
Pre-60S particles
Ribosome quality control proteins
119281117
Membrane trafficking [BR:
tdc04131
]
SNARE
SNARE associated proteins
Others
119281117
Autophagy
Aggrephagy
Other aggrephagy associated proteins
119281117
Exosome [BR:
tdc04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
119281117
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA
AAA_lid_3
RuvB_N
CDC48_N
AAA_2
AAA_33
AAA_16
AAA_5
AAA_14
AAA_22
CDC48_2
TIP49
NPHP3_N
RNA_helicase
AAA_17
nSTAND3
Mg_chelatase
AAA_28
Parvo_NS1
ATPase_2
AAA_18
ABC_tran
nSTAND_NTPase5
AAA_7
NB-ARC
Viral_helicase1
NACHT
ResIII
TsaE
Zeta_toxin
IstB_IS21
AAA_24
DUF815
Vps4_C
Zot
Motif
Other DBs
NCBI-GeneID:
119281117
NCBI-ProteinID:
XP_037417638
LinkDB
All DBs
Position
3B:complement(187683371..187685713)
Genome browser
AA seq
754 aa
AA seq
DB search
MEKLSIFKGDMVLLKGKRRHNTVCMALPDDTCEGHKLRINKVARSNLRVRIADVVSVHLC
HDAKFGRRVHILPLDDTVEGIAGNLFDVYLKPYFVDAYRPLHKGDLFLVRGGMRSVEFKV
MEIDPAVDYCTVAPDTEIFCEGEPVKREDEERLDDIGYDDVGGMGKPLTLIRELVELPLR
HPQIFKSIGVKPPKGILLYGPPGSGKTLIARAVANETGAFFFLINGPEIMSKMAGESESN
LRKAFEEAEKNAPSIIFIDEIDSIAPNREKTHGEVERRIVSQLLTLMDGMKARAHVIVMG
ATNRPNSIDPALRRSGRFDREIDVGVPDEVGRLEVLRIHTKNMKLDEDVNLEVVAKDTHG
YVGADLAALCTEAALQCIREKMDVIDLEDDTIDAEILNSMAVTNDHLKTALVGTNPSALR
ETVVEVPNVSWTDIGGLDGVKRELQETVQYPVEHPKKFEKFGMSPSKGVLFYGPPGCGKT
LLAKAIANECQANFISIKGPELLTMWFGESEANVREIFDKARQSAPCVLFFDELDSIATQ
RGGRVGDAGGAADRVLNQLLTEMDGMNGKKTVFIIGATNRPDIIDSALLRPGRLDQLTYI
PLPDEASRHQIFKACLRKSPVAKDVDLGALARFTSGFSGADITEICQRACKYAIRKDIEK
DIERRRMGKDTMEVDGGLEHEVAEIKAAHFEESMKYARRSVSDAAIRKYQAFAQTLQQSR
GFGTEFRFPAWPQAAEAAVNTSAAADEDEDDLYK
NT seq
2265 nt
NT seq
+upstream
nt +downstream
nt
atggagaagctctccatattcaaaggcgacatggtgctgctcaagggcaagcgccgccac
aacacggtctgcatggcactgcccgacgacacctgcgaggggcacaagctcaggatcaac
aaggtggcccgctccaacctgcgcgtgcgcatcgccgacgtcgtgtccgtgcacctgtgc
cacgacgccaagttcggcaggcgcgtgcacatccttcccttggacgacaccgtcgagggc
atcgcggggaacctctttgacgtctacctcaagccctacttcgtggacgcctaccgcccg
ctccacaagggcgacctcttcctggtgcgtggcggcatgcggagcgtcgagttcaaggtc
atggagatcgaccccgcggtggactactgcaccgtggcgcccgacacggagatcttctgc
gagggcgagccggtaaagcgggaggacgaggagaggcttgacgacattggctacgacgac
gtgggtggcatggggaaaccgctgactctgatcagggagctcgtcgagctgccactcagg
catccgcagatcttcaagagcattggcgtcaagccgcccaagggcatcctcctgtatggc
cctcccgggtccggcaagacgctgatcgcccgtgcggtcgccaacgagaccggggccttc
ttcttcctcatcaacggcccggagataatgtccaagatggccggagagagcgagagcaac
ctgaggaaggcattcgaggaggccgagaagaacgcgccctccatcatcttcattgacgag
atcgactccattgctccgaacagggagaagactcacggcgaggtcgagaggcgcatcgtc
tcccagctgctgactctgatggacggcatgaaggcccgcgcgcacgtcatcgtcatgggc
gccacgaaccgtcccaatagcatcgaccctgccttgaggcgctccgggaggttcgatcgc
gagatcgacgtcggcgtgccagacgaggtcgggcgtctcgaagtgctccgcatccacacc
aaaaacatgaagctggacgaggacgtcaaccttgaggtggttgccaaggatacgcacggc
tatgtcggcgccgacttggccgcgctctgcaccgaggcggcgctgcaatgcatcagggag
aagatggacgtcatcgacctagaggacgacaccatcgacgccgagatcttgaactccatg
gccgtcaccaatgaccaccttaagacggctctcgtcggcacaaacccgtctgcgctacgt
gagaccgtcgtggaggtgccgaacgtcagctggaccgatatcggcggcctcgacggcgtc
aagagggagctgcaagagaccgtccagtacccggtcgagcacccgaagaaattcgagaag
ttcggcatgtcgccgtccaagggcgtcctgttctacgggccaccaggctgcggcaagacc
ttgctggcgaaggctatcgccaacgagtgccaggccaacttcatcagcatcaaggggcca
gagcttctcaccatgtggttcggcgagagcgaggccaacgtgcgcgagatcttcgacaag
gcacgtcagtctgcgccgtgcgtgctgttcttcgacgagctcgactccatcgctacccaa
aggggcggcagagtgggtgacgccggcggcgcggcggacagggtcctgaaccagctgctc
accgagatggacggaatgaacggcaaaaagacggtcttcatcatcggcgccaccaatagg
cccgacattattgactcggcgttgctccgtcccggccgcctggaccagctcacctacatc
cccttgccggacgaggcctcgcggcaccagatcttcaaggcctgcctcaggaagtctcca
gtggccaaggacgtcgacctcggagcgctcgcaaggttcacctccggcttcagcggcgcc
gacatcacagagatctgccagagggcgtgcaagtacgccatcaggaaggacattgagaag
gacatagagaggcggaggatggggaaagacaccatggaggtggacggcgggctggaacac
gaggtggctgagataaaggcggctcacttcgaggagtcgatgaagtatgcgaggcggagc
gtgagcgatgccgccatcaggaagtaccaggcctttgcgcagacgctacaacagtctagg
gggttcggcactgagttccgctttccagcatggccacaggcggcagaagctgccgtcaac
acctccgcggcagctgacgaggatgaagacgatctatacaagtga
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