Triticum dicoccoides (wild emmer wheat): 119281126
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Entry
119281126 CDS
T07278
Name
(RefSeq) cell division cycle protein 48 homolog
KO
K13525
transitional endoplasmic reticulum ATPase
Organism
tdc
Triticum dicoccoides (wild emmer wheat)
Pathway
tdc04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
tdc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
119281126
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tdc03019
]
119281126
03009 Ribosome biogenesis [BR:
tdc03009
]
119281126
04131 Membrane trafficking [BR:
tdc04131
]
119281126
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
tdc04147
]
119281126
Messenger RNA biogenesis [BR:
tdc03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
119281126
Ribosome biogenesis [BR:
tdc03009
]
Eukaryotic type
Pre-60S particles
Ribosome quality control proteins
119281126
Membrane trafficking [BR:
tdc04131
]
SNARE
SNARE associated proteins
Others
119281126
Autophagy
Aggrephagy
Other aggrephagy associated proteins
119281126
Exosome [BR:
tdc04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
119281126
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
AAA_lid_3
CDC48_N
RuvB_N
AAA_2
AAA_16
AAA_33
AAA_5
CDC48_2
AAA_14
AAA_22
TIP49
NPHP3_N
RNA_helicase
AAA_17
nSTAND3
Mg_chelatase
AAA_28
Parvo_NS1
AAA_18
ABC_tran
ATPase_2
IstB_IS21
AAA_7
NACHT
NB-ARC
Vps4_C
Viral_helicase1
ResIII
AAA_24
TsaE
Zeta_toxin
DUF815
Sigma54_activ_2
Rad17
Zot
Molydop_binding
Motif
Other DBs
NCBI-GeneID:
119281126
NCBI-ProteinID:
XP_037417643
LinkDB
All DBs
Position
3B:complement(187923748..187926120)
Genome browser
AA seq
790 aa
AA seq
DB search
MASTAASKKAANRLVVEEAATNDDNSVCNLHPATMEKLSIFQGDIVLLKGKRRHNTVCMA
LPDDTCEGHKVRINKVARSNLRVRIADVVSVHLCHDAKFGKRVHILPLDDTVEGITGNLF
DAYLKPYFVDAFRPVHKGDLFLVRGGMRSVEFKVMEIDPAADYCVVAPDTEIFCEGEPVK
REDEERLDDVGYDDVGGMGKPLTLIWELVELPLRHPQLFKSIGVKPPKGILLYGPPGSGK
TLIARAVANETGAFFFLINGPEIMSKMAGESESNLRKAFEEAEKNAPSIIFIDEIDSIAP
NREKTHGEVERRIVSQLLTLMDGMKARAHVIVMGATNRPNSIDPALRRFGRFDREIDIGV
PDEVGRLEVLRIHTKNMKLDEDVNLEVVAKDTHGYVGADLAALCTEAALQCIREKMDVID
LEDDTIDAEILNSMAVTNDHLKTALVGTNPSALRETIVEVPNVTWNDIGGLDGVKRELQE
TVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELLTMW
FGESEANVREIFNKARQSAPCVLFFDELDSIATQRGGRVGDAGGAADRVLNQLLTEMDGM
NAKKTVFIIGATNRPDIIDSALLRPGRLDQLIYIPLPDEASRHQIFKACLRKSPVAKDVD
LGALARFTAGFSGADITEICQRACKYAIREDIEKDMERQRMGKDTMEVDGGQEDEVAQIK
ASHFEESMRYARRSVSDADIRKYQAFAQTLQQSRGFGTEFRFPAQPQAAEAAVHTSAAAA
ADEDEDDLYK
NT seq
2373 nt
NT seq
+upstream
nt +downstream
nt
atggcgagcacggctgcgtcgaagaaggcggcgaaccggctggtggtggaggaggccgcc
accaacgacgacaactccgtgtgcaacctccacccggccacaatggagaagctctccata
ttccagggcgacatcgtgctgctcaagggcaaacgccgccacaatacggtctgcatggca
ctgcccgacgacacctgcgaggggcacaaggtcaggatcaacaaggtggcccgctccaac
ctgcgcgtgcgcatcgccgacgtcgtgtccgtgcacctgtgccacgacgccaagttcggc
aagcgcgtgcacatcctccctctggacgacaccgtcgagggcatcacgggcaacctcttc
gacgcctacctcaagccctacttcgtggacgccttccgcccggtccacaagggcgacctc
ttcctcgtgcgcggcggcatgcggagcgtcgagttcaaggtcatggagatcgaccccgcg
gcggactactgcgtcgtggcgcccgacacggagatattctgcgagggcgagcccgtcaag
cgggaggacgaggagaggctggacgatgtcggctacgacgacgtgggtggcatggggaaa
ccgttgactctgatctgggagctcgtcgagttgccactcaggcatccgcagcttttcaag
tccattggcgtcaagcctcccaagggcatcctcctctacggccctcccgggtcgggcaag
actctgatcgcccgtgcggtggctaacgagaccggggccttcttcttcctgatcaacggc
ccggagataatgtccaagatggccggagagagcgagagcaacctgaggaaggccttcgag
gaggccgagaagaacgcgccctccatcatcttcatcgacgagatcgactccatcgctcct
aacagggagaagactcatggcgaggttgagaggcgcatcgtctcccagctgctgactctg
atggacggcatgaaagcccgcgcgcacgtcattgtcatgggcgccacaaaccgtcccaac
agcatcgaccccgccttgaggcgcttcgggaggttcgatcgtgagatcgacattggcgtg
ccggacgaggtcgggcgtctcgaagtgctccgcatccataccaagaacatgaagctggac
gaggacgtcaaccttgaggtggttgccaaggatacgcacggctacgtcggcgccgacttg
gccgcgctctgcactgaggcggcgctgcagtgcatcagggagaagatggacgtgatcgac
ttagaggacgataccattgatgccgagatcttgaactccatggccgtcaccaatgaccac
cttaagacggctctcgtcggcaccaacccgtctgcactacgtgagaccattgtcgaggtg
cccaacgtcacctggaatgatatcggcggcctcgacggcgtcaagagggagctgcaagag
accgttcagtacccggtggagcacccggagaaattcgagaagttcggcatgtcaccgtcc
aagggcgtcctcttctacgggccaccgggatgtggcaagaccttgttggcgaaggcgatc
gccaacgagtgccaggccaacttcatcagcatcaaggggccagagttgctcaccatgtgg
ttcggcgagagcgaggccaacgtgcgcgagatcttcaacaaggcgcgtcagtctgcgccg
tgcgtgctcttcttcgacgagctggactccatcgctacccaaaggggcggcagagtgggc
gacgccggtggcgcggcggacagggtcctgaaccagctgctcactgagatggacggcatg
aacgccaagaagactgtcttcatcatcggcgctaccaataggccggacataattgactcg
gcgttgctccgtcccggccgcctggaccagcttatctacatccccttgccggacgaggcc
tcgcggcaccagatcttcaaggcctgcctccggaagtctcccgtggccaaggacgtcgac
ctcggtgcactcgctaggttcaccgccggcttcagcggcgccgatatcacagagatctgc
cagagggcgtgtaagtacgccatcagagaagacattgaaaaggacatggagaggcagagg
atggggaaagacaccatggaggtggacggcggtcaggaagacgaggtggctcagattaag
gcgtctcacttcgaggagtcgatgaggtacgcgaggcggagcgtgagcgatgctgacatc
aggaagtaccaggcgttcgcgcagacgctgcaacagtctagggggttcggcaccgagttc
cgcttcccagcgcagccacaggcggcagaagctgctgtccacacctccgcggcagcagct
gctgatgaggatgaagacgatctttacaagtga
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integrated database retrieval system