Triticum dicoccoides (wild emmer wheat): 119281581
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Entry
119281581 CDS
T07278
Name
(RefSeq) probable pectate lyase 4
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
tdc
Triticum dicoccoides (wild emmer wheat)
Pathway
tdc00040
Pentose and glucuronate interconversions
tdc01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
tdc00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
119281581
Enzymes [BR:
tdc01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
119281581
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Motif
Pfam:
Pectate_lyase_4
Beta_helix
NosD
Motif
Other DBs
NCBI-GeneID:
119281581
NCBI-ProteinID:
XP_037417968
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Position
3B:575961374..575962607
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AA seq
379 aa
AA seq
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MAPKELLLSATLLLLLLRAATGNLRHENVIDRCWRGQSNWATDRQRLAMCSVGFAGKMRQ
NRGHGVTMYTVTDPSDDPVRPRPGTLRYGATVLPGKVWITFQPGTMHIRLAQPLFVKSFT
TIDGRGADVHVAGGAGIVLYEVRNVVIHGLHVHGVRAQPPGQVVRPGGAVQNMDVGDGDA
IRLLSSSKVWIDHNTLARCEDGLLDVTLGSTDVTVSNNWFHDHDKVMLLGHDDQHVADRR
MRVTVAFNRFGPHVNQRMPRIRHGYAHVVNNFYDGWREYAIGGSMGPTVKSQGNLFIAST
TDSANVTRRMPLVGHAEGKDWHWHSSGDSFENGAVFKQTGSRVRPKYNRHQAFPAASSGE
VRSLTKDAGALRCSAGAAC
NT seq
1140 nt
NT seq
+upstream
nt +downstream
nt
atggcacccaaggaattactcctgtccgccaccctcctcttgcttctcctccgagctgcc
accgggaacctccggcacgaaaacgtcatcgatcggtgctggcgcggccagagcaactgg
gccaccgaccggcagcggctcgccatgtgctccgtcggcttcgcggggaagatgcggcag
aaccgcggccacggggtgaccatgtacacggtgaccgacccaagcgacgaccccgtgcgg
cccaggcccggcacgctgcggtacggcgcgacggtgctaccgggaaaggtctggatcacc
ttccagccgggcaccatgcacatcaggctggcgcagccgctcttcgtcaagagcttcacc
acgatcgacggccgtggcgccgacgtgcacgtcgccgggggcgccggcattgtgctctac
gaggtgaggaacgtggtcatccacgggctccacgtgcacggcgtccgcgcgcagcccccc
gggcaggtcgtccggcccggcggcgccgtgcagaacatggacgtcggcgacggcgacgcc
atccggctgctgtccagctccaaggtgtggatcgaccacaacacgctagcgcggtgcgag
gacggcctgctggacgtgacgctcgggtccacggacgtgaccgtctccaacaactggttc
cacgaccacgacaaggtcatgctgctgggccacgacgaccagcacgtcgccgaccgccgg
atgcgggtcaccgtggcgttcaaccgcttcgggccccacgtgaaccagcgcatgccgagg
atcaggcacggctacgcccacgtcgtcaacaacttctacgacgggtggagggaatacgcc
atcggaggaagcatggggccgactgtcaagagccagggcaacctgttcatcgcctccaca
acagacagcgccaatgtgacgagaaggatgcctctggtcggacatgccgagggtaaggac
tggcattggcactccagtggggactcgtttgagaacggcgccgtctttaagcagaccggc
agcagggtgcggccgaaatacaacaggcaccaggcattcccagcggcgagctccggcgag
gtgagatcgctgaccaaggacgccggtgctttgaggtgctccgccggggccgcgtgctga
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