Triticum dicoccoides (wild emmer wheat): 119282858
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Entry
119282858 CDS
T07278
Name
(RefSeq) E3 ubiquitin-protein ligase UPL4-like
KO
K10590
E3 ubiquitin-protein ligase TRIP12 [EC:
2.3.2.26
]
Organism
tdc
Triticum dicoccoides (wild emmer wheat)
Pathway
tdc04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
tdc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
119282858
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
tdc04121
]
119282858
Enzymes [BR:
tdc01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
119282858
Ubiquitin system [BR:
tdc04121
]
Ubiquitin ligases (E3)
HECT type E3
119282858
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HECT
Arm
HEAT_EZ
Adaptin_N
Htt_N-HEAT_1
HEAT
HEAT_2
RGM_N
Motif
Other DBs
NCBI-GeneID:
119282858
NCBI-ProteinID:
XP_037418799
LinkDB
All DBs
Position
1A:complement(499805412..499813678)
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AA seq
1520 aa
AA seq
DB search
MDRCRKRPDSDPGGSGEAEPPADKRPCTAEPSTSAAAAVSAPGLPEQAASDMDTSSSGHA
AEADADADVDGDDGDGDGDGDGGSSCESDGDGGPGSGKFRRMVAAVASEGAGGGALLASL
TELCEALSFCTEDAGGYFPVESAARALVRLAGADVASPDELLLAVRAITYLCDAMPRAAD
AVVRHGLLPVLCSRLLAIEYLDVAEQCLQAFEKISLRQPAQCLQAGMITAVLAYIDFFSA
SIQRVAVSAVANACKKVPADCSQFVMDSIPMLCNLLQSEDKMVVEKVATCLISIVDSFSG
SVELLDQLCHQGLVEKVLPLINASGLTSLNPSTCSNLIGLLAKLACTSLVAVKSLFELNV
GSTIRGILVSSDLSHGMPYLPSENQNNQVNEALKLAIQLIPSAARDVEDTYIVLAKEKII
VDEPGFLCQFSTDILPILIKAVNSGANSYICYGCSSIVNNICYFSKPEMLQELLKETNIS
SFLAGLLSRKDHHVLISSLKIIEILMQKLPDAYLGSFIKEGVVNAVEALLMQEDCSKSSP
PLSDDTQQSENQPVIRNKPTCFCYAFDSRQSESAETRACRIGQGNLFNFARHVKTTYFTA
EAVNSEMGLTEILQKLKTCCAVLNDSADKSFNQDSLQNEEHLSTILSEVMMELHGGETMT
TFEFLESGLVKSLLNYLSNGKYLQVDDNLKDYNAEHFCAVLKRFQSFARICFSRMEQGWG
DMLLTLLVRKLQNALTSLDNFPVIMSHNFKPRNNISDIPIRHSTISPCIRVRFKKDEDET
NLSSYDNSVNLEISSSLHSIEQFLWPKVSTCTSDQNTESPPSSVAFESKCAEDDPQERDS
SPESSPSSEGIIRENQNSYVEPCSKKGSPSSAGGQPERNKSTGTDCAVQPKLVFSLKGKE
LDRSVTLYQSILQDQINAGADVILDTQFWRSVHDITFRTAANPEKDDSPENLSNAAISTN
DSKTGLMWQALPFFSSLLLGKIPCKLDRSNSLYDILFMLKVLEGLNRYSFHLVSNERNHA
FAQGKLTDLDDLKPSVSSVPLQEFVSAKLTDKLEQQMHDPLVLRSRCLPLWCTELMSACP
FLFSFEARWKYFQLTAFGSSSMQRGHMIDTSGSNISTERGSPISRKKFKVDRDDILASAA
KMMHSYAKSSALLEVEYEEEVGTGLGPTMEFYTLISHEFQKSGLGMWRGELSCEAGTNNA
HIGSRTVVAPNGLFPRPWSASVDCASFSEINKRFHLLGQVLAKAIKDGRILDIPFSKAFY
KLILGQELNIYDINSFDPELAMTLMEFKALTCQRKYLESCSTKECQSTSDLSYRGCKIED
LVIDFAVPGYPEYVLSSEGTSDNVTGENLEEYVSFVVEATVKSGITRQLEAFESGFSQVF
PLSTLRAFSEDELERLLCGEQDNWDFVKLVDHIKFDHGYTSSSPAVLNLLEIIQEFGCHE
RRAFLQFITGSPRLPPGGLAALNPNLTVVRKHSNNDADDDLPSVMTCANYLKLPAYCSKE
RMREKLLYAITEGQGSFHLS
NT seq
4563 nt
NT seq
+upstream
nt +downstream
nt
atggatcgctgccggaagcgccccgactccgaccccggcggctccggcgaggccgagcct
cccgccgataagcgcccctgcaccgccgagccctccacctccgccgccgccgccgtctcc
gcgccggggctgccggagcaggccgcctccgacatggacacctcgtcgtccggccacgcc
gccgaggccgacgccgatgccgatgtggacggcgacgatggggacggggacggggacggg
gatggcgggtcgtcgtgtgagtcggatggggacggggggcccgggagcggcaagttccgc
cggatggtggcggccgtcgcctcggagggcgccgggggaggcgcgctgctcgcgtcgctc
acggagctctgcgaggcgctctccttctgcaccgaggacgccgggggctacttccccgtc
gagtccgccgcgcgggcgctcgtgcggctggccggcgccgacgtcgccagccccgacgag
ctgctgctcgccgtgcgcgccatcacctatctctgcgacgccatgccgcgcgccgccgac
gccgtcgtccgccatggcctgctccccgtgctctgctcccgcctcctcgcaatcgagtac
cttgatgtggccgagcagtgcttgcaggcgttcgagaagatatcgctgcggcagccggcg
cagtgcttgcaggcaggcatgatcaccgccgtgctcgcatacattgacttcttctctgca
agtattcagagggttgctgtctcagctgttgcaaatgcctgcaagaaggtccccgcagat
tgctcccagtttgtgatggattcgatcccaatgctgtgtaatctactgcagtctgaggac
aagatggttgttgaaaaggttgcaacttgcctgataagcattgtagactcttttagtggt
tcagtggagcttcttgaccagctctgccaccagggcctggtagagaaggtccttcctttg
atcaacgccagcggactcacttcccttaatccatcaacttgcagtaacttgatcgggctt
cttgctaagctagcctgtacttcacttgtggcagtgaagtctctctttgagttgaatgtt
ggtagcaccataagggggattttggtcagttcagatctctcccatgggatgccatacctg
ccttcggaaaaccaaaataaccaggttaatgaagctctgaaattagcaatccagcttatt
ccttctgcggcaagagatgttgaagacacctatatagtacttgctaaagaaaaaataatt
gtcgatgaaccagggttcttgtgtcagttctctacggatatccttcctatcttgatcaag
gcagtcaactctggtgcaaattcgtacatttgctatggctgttcttcaattgtaaataac
atctgttacttcagtaaacctgaaatgcttcaagagttgctcaaggaaacaaacatatca
agcttcttggctggtttattgtcccggaaggatcatcatgtgctaatctcatcactgaag
attatcgagattctcatgcaaaagcttccggatgcttaccttggatcttttatcaaagaa
ggtgttgtcaatgcagtagaggctcttcttatgcaagaggattgctcaaagtccagcccc
cctctctctgatgacactcaacagtcagaaaatcaacctgttataagaaataaacctaca
tgtttctgctatgcatttgattcccgccaatctgaatctgctgaaacaagggcttgtagg
attgggcaggggaacctttttaatttcgcaagacatgtgaagacaacttactttacagct
gaagcagtgaattcagagatggggttaacagagattttgcagaagctcaaaacttgctgt
gcagttctaaatgactctgccgacaagtcattcaaccaagacagtcttcaaaatgaagaa
cacctgtctaccattttgagcgaggtgatgatggagcttcacggaggagaaacaatgacg
acgtttgaattccttgagagtggactggtcaaatctttgttaaattacctgtctaacggc
aaataccttcaggtggatgacaatcttaaagattacaatgctgaacatttttgtgctgtg
ctgaaaagatttcagtcatttgcccggatttgtttctcaagaatggagcaaggttggggt
gatatgctcttgacactacttgtaaggaaactgcagaatgctcttacttctcttgacaac
ttcccagtgataatgagccacaatttcaagccaaggaacaatatttctgatatccctatt
cgccactcaacaattagtccatgtatccgagtacgtttcaagaaggatgaagatgaaaca
aacttatcaagctatgataattctgtgaatttggaaatctcttcttccttgcattctatc
gaacaatttctgtggcccaaagtcagtacatgcacaagtgatcagaatactgaatcacca
cctagtagtgttgcttttgagagcaaatgtgctgaagatgaccctcaggaaagagattcc
agcccagaatcttctccttcatcagagggtatcatcagggaaaatcaaaattcttatgta
gaaccatgctcgaagaaagggtcgccatcttctgctggaggtcaaccagaacgaaacaag
tcgaccgggactgattgtgctgtacagccaaaactggtatttagcctgaaaggaaaagag
cttgaccgatctgttactctatatcaatcaatcctgcaagatcagatcaatgcgggagct
gatgtaattttggacacccagttttggcgcagtgtgcatgacataacatttcgaacagct
gcaaatccagaaaaagatgattctcctgagaacctgtctaatgcagcgatatcaacaaat
gacagtaaaactggtttaatgtggcaagcactccctttcttcagcagcttgttgcttggc
aagatcccttgcaaacttgatagatcaaattcattgtatgacatattgtttatgctgaaa
gttttagaaggattaaaccgatactcgtttcacctcgtgtctaatgagagaaaccatgct
tttgctcaagggaagttaactgaccttgatgatctgaagccttctgtttcttcagttcca
cttcaggagtttgttagtgctaaattgacagataaactggagcaacagatgcatgatccc
ttggttttaaggtctcgctgtctgcctttatggtgcactgaactgatgtctgcgtgccct
ttcttattttcctttgaggcaagatggaagtatttccaactgacagcatttggttcttca
tcaatgcaacgtggtcatatgatagatacaagtggtagcaatatatcaacagaaagaggt
tcacccatttcacggaaaaagttcaaagttgatcgtgatgatatactggcttcagctgcg
aaaatgatgcattcctatgctaagagtagtgcactgcttgaagtagaatatgaagaagaa
gtaggcacaggtttaggtcctacaatggagttctatacgttgataagtcatgagtttcag
aagtctggtttaggcatgtggaggggtgagctttcttgtgaagctggcaccaacaatgct
cacattggttcccggactgtggtcgcgcctaatggactgtttcctcgaccgtggtctgct
tctgtagattgtgcttccttctcggaaataaataaaaggtttcacctccttggtcaggtt
ctcgcaaaggcaattaaggatggcagaattcttgacattccattttccaaagcattttac
aagcttatcctaggacaggagcttaatatatatgatatcaattcatttgatcctgaactc
gcaatgacccttatggagtttaaagcgcttacttgtcaaaggaaatatttagaatcatgt
tcgacaaaggaatgccagagcacatctgatttgtcttatcgtggttgtaaaattgaggat
cttgttattgactttgctgtcccagggtatccagaatatgtgctttcttcagagggtact
tcagacaatgtaactggtgagaatttggaagaatatgtttcttttgttgtcgaggcaacg
gttaaaagtggaatcacaagacagctggaggcttttgagtcaggattcagtcaggtattt
ccactaagcacacttcgggcattctcagaggatgagctggagagattactctgcggagaa
caagataactgggattttgtgaaacttgtggatcacataaaatttgatcatggctacacc
tccagcagtcctgcagtccttaatttgttagagatcatacaagagtttggatgccatgaa
cgcagagctttcttgcaatttataacgggttcacctcggctccctccaggcggtctggct
gcactgaatccaaatttgacagttgtcaggaagcatagcaacaacgatgctgatgatgat
ctgccaagtgtgatgacttgcgctaactatcttaagttacctgcctactgctctaaggaa
aggatgagggagaagctactctacgcgattactgaggggcaggggtccttccacctgtcc
tga
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