Triticum dicoccoides (wild emmer wheat): 119283360
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Entry
119283360 CDS
T07278
Name
(RefSeq) uncharacterized protein LOC119283360
KO
K10875
DNA repair and recombination protein RAD54 and RAD54-like protein [EC:5.6.2.-]
Organism
tdc
Triticum dicoccoides (wild emmer wheat)
Pathway
tdc03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
tdc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
119283360
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tdc03400
]
119283360
DNA repair and recombination proteins [BR:
tdc03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Rad54 family proteins
119283360
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
RVT_1
Helicase_C
Exo_endo_phos
Exo_endo_phos_2
ResIII
DEAD
Motif
Other DBs
NCBI-GeneID:
119283360
NCBI-ProteinID:
XP_037418834
LinkDB
All DBs
Position
4A:15753514..15780966
Genome browser
AA seq
1658 aa
AA seq
DB search
MSKELIDFVALQETIKADFSFRDLLAYDPLQRFDWFWIPSVGLSGGQLMGCNKDVCEVIS
WEGGTFYIAATIRHRVSQASWVIASVYGPADHARSAIFLDEITAMVGAKQSSNLPVVVGG
DFNLIRSGADKSNNNIDWARVSMFNNAIAYAALREIARTGARYTWTNKQREPIRCVLDRV
FCTSDWEALFPLCTLVAETRIGSDHVPLILSSGEDNVRRSHRFFFETAWFEHEGFSQLVT
NRWSQIGNQLGRQRGPVEFWSSAAAALRAFLRGWGANHGSESKRERERITADIALLDSQA
DIRTFSGDEWELRYSLEHQVLAILRAEEEYWRRRGGVKWVVKGDANTGYFHAYANGRKRK
STILRLQSERGMLISQNDIAKYIYSFFVELLGTAEVKNLSLRADFWGMHEQVSQQENDAL
MVSFSAQEIDCALAGMKNDTAPGPDGWPVEFFKRFWPLLRDLFQAIINGFALGTVDLSRL
NYGAICLIPKVKGAEAITQFRPITLINVPFKLCAKAYASRLATVAQQVISSSQTAFLKGR
NILEGPIALTEIVHELKRTQEQGVIIKLDFEKAYDRVNWEFIREVFLKKGFEAGFVHRIM
SLISSGNTSVIVNGEMGKYFRNRKGLRQGDPISPLVFNFVADAMAAMLTKAREAGHIKGP
PEASNTQRFHFFAARTSEGSLLSSPSAGFELPPSNPRPASSSSAPPCIDPTNYKMQKHEI
GHDSSPGTQSLSTIISHNRSVRLRFLKEFNELKYGSVTEDYKAINRKRHELISTLEKLQL
VPIKLPYASVALKSSNVTLHDEAQSGNNISSDNIIELDLYNVGDDTHATMDNTGAQKTVC
LLDSDDEDTVQSFVDGNLSDSKQNTDFIQECMLAEQPCQYQDISFEAQLVVEPGKDSMDI
DNEPKEIALFDGHSTSEPQLIKQGQNDINIYAESRDKERETGEGEGEDVQSKQHMENNNI
SVADSCEISCEVIQSNSTANGHYNHYDNNDNPVDDLDDLWNEMSVALACSKTIGSDHSIV
PSEKNNSEVVDDCHHDFLMKDDLGIVCRVCGLIQQRIENIFEINWKKRKQSHRTYAPEPR
NYNELEATTSPSGNILQVVPSALSIHSQHSEQMKPHQVEGFNFLVKNLADENNPGGCILA
HAPGSGKTFMLISFVQSFLARYPAGRPLIILPKGILATWRTEFVHWQIKDMPIPLFDFYS
SKANTRSEQLKVLNLWEEKRSILLLGYHQFACIVSDRNTYKIEAVMCRDKLLKVPSLVIL
DEGHTPRNEQTDLLTALGSIRTPRKVVLSGTLFQNHVREVFNILNLVRPKFLKMEKPRAI
VKRILSKVDMLGKSARSKYTSDKYFYDVVEGNLKKDADDKMRVMIIQNLRELTANVLHYY
KGELLEELPGLVDFTVFLNMSTEQENILRSLVRLDNFSRKTACSAVYLHPCLKNIQNVEG
KNRDIAVQKIDSIIKSGIDIKVGAKAKFIYNLLCLSEAAGEKVLVFSRYLNPLVFLEMLL
IRMKGWKPEVHMFKLNGKSTQEQRDKAVERFNHSADAKVLFGSIKACGEGISLVGASRVV
ILEVQENPSVTRQAIGRAFRPGQSRMVHCYRLVAADSPEEEDHMTASGKEWKSKMWFEWN
ELCSSDDFELAAVDISESGDRFLEHEALRQDVKSLYRR
NT seq
4977 nt
NT seq
+upstream
nt +downstream
nt
atgtccaaagaactcattgactttgtggcgctccaggagactattaaagccgatttctcc
tttagagaccttttggcgtatgatccgctccagcgttttgattggttctggattccgtct
gtcggcctctctgggggtcaactgatgggttgcaacaaggatgtgtgtgaggttatatcg
tgggagggcggcacgttctatatagctgccactatccgtcaccgggtctcccaagcttct
tgggtgatcgcgagtgtttatgggccggcggatcacgcgaggtccgctattttcttagat
gaaatcacagctatggtgggggccaaacaatcgtccaacctaccagtggtggtaggaggt
gatttcaacttgatccgctcgggggcggacaaaagcaacaacaatattgactgggctagg
gtgtccatgttcaataatgccattgcgtacgctgcccttcgggagatcgcgcgtactggg
gccagatacacttggactaacaagcaacgtgagccaatcagatgtgtcctggaccgtgtc
ttttgcactagtgactgggaggcgctgtttcctctctgtactttagtggcggaaacgcgc
ataggatccgatcacgtcccgctgattttgtcctcaggggaggacaacgtgcgccgtagt
catagattcttctttgagacagcttggttcgaacatgagggtttcagccagctagtcaca
aatcgctggtcccagatcggcaaccagttggggcgtcaacgaggaccagttgagttctgg
tcctcagcggctgcggctttgcgtgctttccttaggggctggggagctaaccatggtagc
gagtccaaaagggagagggagcgcattacggcagatatagccctcctcgactcgcaggct
gatattagaaccttctctggtgacgaatgggagcttagatactctcttgaacatcaggtc
ctggctattctcagggcggaggaggaatactggcgccgtaggggtggtgtcaagtgggta
gtgaaaggcgatgcaaacacaggatactttcacgcttacgctaacggtcgcaaacggaag
agcactatccttaggctccaatcagaacgtgggatgctgatatctcagaacgatatagcg
aagtacatctatagcttcttcgttgagctgttgggaacagctgaggtgaaaaacctaagt
cttagggcagacttttggggcatgcacgaacaagtctcgcagcaggaaaacgacgccctt
atggtgtccttttcagcccaggagattgattgcgcacttgcgggtatgaagaacgacacg
gccccagggcctgacggctggccggtggagtttttcaagcgcttctggccgctgcttagg
gacttattccaagcgatcataaacggcttcgccctaggtacggttgacctgtctcgtctg
aattacggggccatctgcctaatccccaaggtcaaaggggcagaagctattacacagttt
cggccaattacgctcatcaatgttccctttaaattgtgcgccaaagcttatgcttctagg
ctagcgacggtcgcccaacaagttattagttcgagccaaactgctttcctgaagggtagg
aacatcctggaagggcccattgctcttacggagattgtacacgagttaaaacgaacacag
gagcagggtgtcattattaagttagatttcgaaaaagcttatgaccgcgtaaattgggag
tttattcgcgaggtcttcctcaaaaagggttttgaggcagggtttgttcaccggatcatg
agcctgatctcgagtggcaacacctcggtcattgttaatggcgagatggggaaatatttc
cgtaacaggaaagggcttagacagggcgatcccatatccccacttgtctttaattttgtg
gcagatgcaatggcagccatgttgaccaaggccagggaggccggtcacatcaaggggcca
cctgaagcgtccaacacccaacgcttccacttctttgctgcaagaacatcggaggggtca
ttgctctctagcccaagcgcaggattcgagctccccccaagcaatccccggccggcatcg
tcttcctccgctcctccgtgcattgatcctactaactacaaaatgcagaagcatgaaatc
gggcatgatagctcgccgggcacccagtccctgtcaaccatcatcagtcataacagatct
gtgcgtcttagatttctcaaagaattcaatgagttgaagtacgggagtgtcactgaagat
tacaaggcaatcaatcgaaagaggcatgaacttatcagcacccttgaaaagctgcaactt
gtacctatcaagttgccctatgccagtgtagctctcaagtcatcaaatgtgacattacat
gatgaagcacaaagtgggaacaatattagttctgataatattatagaattggatctgtac
aatgttggagatgatacccatgctaccatggacaatactggggctcagaaaactgtttgc
ttacttgattctgatgacgaggacacggttcaatcctttgtagatggaaatttatctgat
tctaagcaaaatactgattttatccaagaatgcatgctggctgagcagccttgccaatac
caggacatcagttttgaagctcaacttgtagttgagccaggaaaggacagcatggacatt
gacaatgagcccaaggaaatcgctttatttgatggccatagtacttcagagccacaactg
atcaagcaaggacagaatgacataaacatttacgccgagagtcgtgacaaggagagagaa
acaggggaaggagaaggtgaggatgtccaaagtaaacaacacatggagaacaacaatata
tctgttgcagattcttgtgaaatatcttgtgaggtcatacaaagtaattcaacggcaaat
ggacattataatcactatgataacaatgacaatccagttgatgacctggatgacctttgg
aacgaaatgtctgttgcattggcatgttcaaagaccattggaagcgatcacagtattgtt
ccgtcggagaagaacaattctgaagtagtggatgattgtcatcacgacttcctgatgaaa
gatgatttgggcattgtatgtcgtgtttgtggtttgatccagcaacgtatcgagaatatt
tttgagataaactggaaaaagcgtaagcaatcccacagaacttatgcgccagaacccaga
aactacaatgagctggaggcaactaccagtccttcaggaaatattcttcaagttgtccct
agtgctctctcaatccactctcagcattcagaacagatgaaacctcaccaagtggaaggc
tttaatttcttggtcaagaacctggcagatgagaacaaccctggaggttgtattctagca
catgcaccaggttctggaaagacttttatgctaattagctttgttcaaagcttcctggcc
agataccctgcaggaaggccattgattatccttccaaagggcattctggcaacatggaga
acagaatttgtccattggcaaattaaggacatgcccatacccttgtttgacttctattcc
tccaaagctaatacccggtctgaacaactcaaggttttgaacttgtgggaagaaaagaga
agcatattgctgctagggtatcatcaatttgcatgcatagtatctgataggaatacttat
aaaatagaagctgtcatgtgccgagataagttgttgaaggtcccaagccttgtcattcta
gatgaaggccacactccgagaaatgagcaaactgacttactcactgcacttggaagtata
agaactcctagaaaagtggttctctcaggaaccttgtttcagaatcatgtaagagaggtt
ttcaacattctgaaccttgtgcggccaaaattcctgaagatggagaaacctcgtgcaata
gtgaagcgcatactaagcaaggttgacatgttggggaagagtgcacggtcaaagtacact
tcagataagtacttctatgatgtagttgaaggaaaccttaaaaaggatgcagatgataaa
atgagagtaatgatcatccagaatctacgcgagctaaccgcaaatgtgctgcactattat
aaaggtgagcttttggaggaactacccggacttgtggacttcaccgtttttctgaatatg
agtaccgagcaggaaaatatccttaggagtttggtaagactagataattttagcaggaaa
acagcatgcagcgctgtttatcttcatccgtgcttaaagaatattcaaaacgttgaaggg
aaaaatcgagatattgctgttcagaagattgattccatcataaaaagtggaattgatatc
aaggttggggcaaaggcaaagtttatatacaatttgttgtgtctttcagaagctgcagga
gagaaggtactcgtgttcagccggtatctgaaccctctggttttcttggaaatgctgctc
ataagaatgaaaggatggaaaccagaggtgcacatgtttaaattaaatggtaaatcaaca
caagagcagcgagacaaggcggttgagagattcaaccactcagcggatgctaaagttttg
tttggttccatcaaggcatgcggcgagggcatctcccttgttggcgcatcacgcgttgtc
attctggaggtccaggaaaatccttctgtgacgcgacaggcaattggacgggcattcaga
ccagggcagtcccgaatggtgcattgctaccgccttgttgccgccgactccccagaagag
gaggatcacatgacagcctccggaaaagaatggaagtccaagatgtggttcgaatggaac
gagctttgcagcagtgatgattttgagcttgccgctgtggatatttcagagagcggggac
aggtttctcgaacacgaggcactgcgacaagatgtcaaatctctgtacagaaggtga
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integrated database retrieval system
