Triticum dicoccoides (wild emmer wheat): 119284530
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Entry
119284530 CDS
T07278
Name
(RefSeq) pseudouridine-5'-phosphate glycosidase-like
KO
K16329
pseudouridylate synthase [EC:
4.2.1.70
]
Organism
tdc
Triticum dicoccoides (wild emmer wheat)
Pathway
tdc00240
Pyrimidine metabolism
tdc01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
tdc00001
]
09100 Metabolism
09104 Nucleotide metabolism
00240 Pyrimidine metabolism
119284530
Enzymes [BR:
tdc01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.70 pseudouridylate synthase
119284530
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Gene cluster
GFIT
Motif
Pfam:
Indigoidine_A
Motif
Other DBs
NCBI-GeneID:
119284530
NCBI-ProteinID:
XP_037419553
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Position
4A:complement(5264039..5269237)
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AA seq
327 aa
AA seq
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MSKAPPREDPSPTGVAVSPEVEAALASGGAVVALESTIICHGMPYPKNLQTAMEVEAIVR
ENGAVPATIAILNGVPHVGLNSEQLKNLAISGSQFQKTARRDIAQVVASGGNGATTVSAT
MFFAHKVGIPIFVTGGIGGVHRYGEKTMDISSDLTELGKTPVAVISAGVKSILDIARTLE
YLETQGVTVAAYRTNEFPAFFTETSGCKVPCRVDSPEECAKIIYANQNMHLGSGILIAVP
VPKQHAASGKVIESAIQQSLKEADDKKIIGNAITPFILDRVKVLTGGSSLEANIALVKNN
ALTGAKIAVALSDLRKRVTNRPVRSAL
NT seq
984 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaaggcgccgccgcgggaagacccgtcgccgacaggcgtcgcggtgtctccggag
gtcgaggccgcgctcgcgagcggcggggcggtcgtcgccctcgagtccaccatcatctgc
cacggcatgccctacccgaagaacctccagacggccatggaggtggaggccatcgtcagg
gagaacggcgctgttcctgccaccatagccattctgaacggcgtgccacatgttgggctt
aacagtgaacagctgaagaacttggctataagcggaagtcagtttcagaagacagctaga
agagatatcgcgcaagttgttgcgtcaggcggcaatggtgctacgacagtctctgccacc
atgttttttgctcataaggttggtataccaatttttgtgactgggggaattggaggcgta
cacagatacggtgaaaaaaccatggacatctcatctgacttaactgaacttggaaagact
cctgtggctgttatttcagccggtgtgaagtccattttggatatcgcacggacgctcgag
tacttggaaactcaaggggtaactgttgctgcttacagaaccaacgaatttccagctttc
ttcacagaaaccagtggatgtaaggtgccatgtcgcgttgattctccagaagagtgtgcg
aagataatatatgcaaaccagaatatgcatctaggatctggaattcttattgcagtgcca
gttcccaagcaacatgcagcctcaggaaaggttatagagtctgcaatacagcaatccctc
aaggaagcagatgataaaaagataataggaaatgcaatcacccccttcatccttgacaga
gtgaaagtactaactggaggatcttcattggaagccaacattgcacttgtgaagaacaat
gctctcactggtgctaaaattgctgtagccctttcagatcttcgcaagagagtaacaaac
aggcctgtgaggtctgcgctataa
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