Triticum dicoccoides (wild emmer wheat): 119284612
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Entry
119284612 CDS
T07278
Name
(RefSeq) rhamnogalacturonan I rhamnosyltransferase 1-like
KO
K23280
rhamnogalacturonan I rhamnosyltransferase [EC:
2.4.1.351
]
Organism
tdc
Triticum dicoccoides (wild emmer wheat)
Brite
KEGG Orthology (KO) [BR:
tdc00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
tdc01003
]
119284612
Enzymes [BR:
tdc01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.351 rhamnogalacturonan I rhamnosyltransferase
119284612
Glycosyltransferases [BR:
tdc01003
]
Polysaccharide
Structural polysaccharide
119284612
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Gene cluster
GFIT
Motif
Pfam:
O-FucT
CR_prot_dom_plant
PRIMA1
Motif
Other DBs
NCBI-GeneID:
119284612
NCBI-ProteinID:
XP_037419653
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Position
4A:12391558..12395075
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AA seq
471 aa
AA seq
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MARSRPRFWLVAGCVALLLWASVAQLVAVGRLLSLFGLAGSAPGPSPPPSSPPPPPPPPR
IYKSNGYLKISCNGGLNQMRSEICDMVAVARLLNLTMVVPELDKRSFWADQSNFGDIFDV
RHFITSLRDEVRIVKRLPKRFGPTDSGIMLDMSPVSWSDEKYYLHQILPLFSKYKVIHFN
KTDARLANNGISTELQLVRCRVNFRALKFTPQIEALGNKLVQKLRDKGSFVALHLRYEMD
MLAFSGCNHGLNPEEAEELKRMRYAYPWWRDKEIDSKTKRSEGLCPLTPEETSLVLKALG
FEKDTLIYIAAGEIYGGEKRLKPLRAAFPKLVRKEMLLDSEPLRQFQNHSSQMAALDFIV
STASDVFLPTYDGNMAKLVEGHRRFLGFRKSVLPDRRKLVELIDLYNNKTISWENFTSSV
QEVHRGRVVQPSCRRKLENKPKEEDYFYANPHECLANSSLCSGSKDTVTVR
NT seq
1416 nt
NT seq
+upstream
nt +downstream
nt
atggcgcggtccaggcctaggttctggctcgtggcgggctgcgtcgccctgctgctctgg
gcctccgtcgcgcagctcgtcgccgtcggccgcctcctctccctcttcggcctcgccggc
agcgcgcccggcccctcgccgccgccttcctcgccccctcccccgccgccgcccccaaga
atctacaaaagcaatggctatctgaagatatcctgcaatgggggtcttaatcagatgcgt
tcagagatatgtgacatggtggcagtggcgcgtttgctaaacctcacgatggttgtgcca
gagcttgacaagagatcattctgggctgatcagagcaattttggagacatatttgatgtg
aggcatttcattacctcattaagagatgaagtgcgcattgtcaaacggctgccaaagagg
tttggtccaacagattcaggcatcatgctggacatgtcacctgtgagctggtcagatgag
aaatactacttgcaccagatcttaccactcttcagcaaatataaagtcatacactttaac
aagacagatgctcggttagcaaacaatggcatcagtactgagcttcaacttgttagatgc
cgtgttaattttcgtgctctgaagtttacccctcaaattgaggcactggggaataaattg
gtacagaaacttcgagacaagggatcatttgtggcattgcatttacgatatgagatggac
atgctcgcattttctggttgcaatcatggccttaatcctgaagaagccgaggaactcaaa
agaatgagatatgcatatccatggtggagagataaagaaattgattcgaaaaccaagaga
tcagaaggactatgcccacttacgcctgaggagacgtcactggttttgaaagcactgggc
tttgaaaaggatactctcatatacattgctgctggtgaaatttacgggggagaaaagaga
ttgaaaccattacgagctgcttttccaaaacttgtaagaaaagagatgctgctagattca
gaacctctgcgccagtttcaaaaccattcttctcagatggctgcactcgatttcattgta
tccactgctagtgatgtgttccttcctacctatgatggtaacatggcgaaacttgttgaa
ggccacagaaggttcctgggtttccgaaaaagcgtgttgccagaccgacggaaactagtt
gaacttatagacttgtacaacaacaagacaatttcttgggagaattttacatcttctgtc
caagaagttcatagaggccgtgtggtccaaccgtcctgtcggcgaaaactcgaaaacaag
ccgaaagaggaggattatttctacgctaacccccacgagtgcctggccaattcaagcctg
tgcagtggaagcaaggatacagtcactgtaaggtga
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