Triticum dicoccoides (wild emmer wheat): 119284924
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Entry
119284924 CDS
T07278
Name
(RefSeq) replication protein A 70 kDa DNA-binding subunit B-like
KO
K07466
replication factor A1
Organism
tdc
Triticum dicoccoides (wild emmer wheat)
Pathway
tdc03030
DNA replication
tdc03420
Nucleotide excision repair
tdc03430
Mismatch repair
tdc03440
Homologous recombination
tdc03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
tdc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
119284924
03420 Nucleotide excision repair
119284924
03430 Mismatch repair
119284924
03440 Homologous recombination
119284924
03460 Fanconi anemia pathway
119284924
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
tdc03000
]
119284924
03032 DNA replication proteins [BR:
tdc03032
]
119284924
03400 DNA repair and recombination proteins [BR:
tdc03400
]
119284924
Transcription factors [BR:
tdc03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
119284924
DNA replication proteins [BR:
tdc03032
]
Eukaryotic type
DNA Replication Elongation Factors
RPA (replication protein A)
119284924
DNA repair and recombination proteins [BR:
tdc03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
RPA (replication factor A)
119284924
MMR (mismatch excision repair)
119284924
DSBR (double strand breaks repair)
HR (homologous recombination)
119284924
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rep_fac-A_C
Rep-A_N
REPA_OB_2
tRNA_anti-codon
DUF223
Motif
Other DBs
NCBI-GeneID:
119284924
NCBI-ProteinID:
XP_037420007
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All DBs
Position
4A:complement(49166370..49169983)
Genome browser
AA seq
622 aa
AA seq
DB search
MDAKSVTPSAVALILANPTPESPDDVPEIVVQVLDLKPIGSRFTFMASDGEAKVKAILST
HFASEVHSGKLQNLGLVRILNYTCNDIPQKTDKMVIITKCEVVSQALDAEIKSEVKIEEP
SVLMKPKEEAAGLSKPIGAAPATIMLKPRHDVKSASQIVSEQRGNAAPAARLAMTRRVHP
LISLNPYQGNWVIKVRVTSKGNLRSYRNARGEGHVFNVELTDEDGTQIQATMFNEAAKKF
YPVFELGKVYYISKGSLRIANKQFKTVQNDYEMTLNETAVVEEAEGESFIPPVQYNFVKI
DMLGPYVGGRELVDIIGVVQSVSPTLSIRRKIDNESIPKRDIVVADDSNKTVTISLWNDL
ATTVGEELLDMVDSAPIIAVKSLKVSDFQGVSVSTVGKSTLVINPELPEAEKLKAWYESE
GKGTTLASVGAGMGASNAGGLRSMYSDRVFLSHITSDPNLGQDKPVFFSLYANISNIKPD
QTMWYRACTTCNKKVTEALGSGFWCEGCQKNYEQCSLRYIMVIKVSDPTGEAWLSLFNDQ
AERIVGCSADELDRIRKEEGDDLFQLKLKEATWIPHLFRVSVVQNEYMGEKRQRITVRSE
SPVDYSAEARYQLEEIAKLTSS
NT seq
1869 nt
NT seq
+upstream
nt +downstream
nt
atggacgccaagtcggtgacgccgagcgccgtggccctcatcctcgccaaccccacgccg
gagtcgcccgacgacgtgccggagatcgtcgtgcaggtcctcgacctcaaacccatcggc
tcccgcttcactttcatggccagcgacggggaggcgaaggtcaaggcgatcctctccacc
cacttcgcgtcggaggtccactccggcaagctccagaacctcggcctcgtccgcatcctc
aactacacatgcaacgacatcccacaaaagacggacaagatggtgatcatcaccaagtgc
gaggtcgtgtcccaggctcttgacgccgagatcaagagcgaggtcaagatagaagagcca
tcggttctcatgaagcccaaggaggaggctgcgggtctctccaagcccattggcgccgcc
ccggctacgattatgctgaagccaaggcacgacgtgaagtccgcgtcccagattgttagc
gagcagcgcggaaatgctgctcccgctgctcgcttggccatgacgaggcgggtgcatcct
ctgatctccctcaatccctaccagggcaactgggtcatcaaggtgcgggtcacaagcaag
ggcaacctcaggtcatacaggaatgcccgtggagaaggccatgtcttcaacgtagagctc
actgacgaggatggcacccagatccaggccaccatgttcaatgaggctgcaaagaagttc
tatcctgtgtttgagttggggaaggtctactacatctccaagggttcactcagaatcgcg
aacaagcagttcaagacagtccagaatgactatgagatgaccctgaatgagactgctgtt
gttgaagaggctgagggggaatctttcattccaccagtgcaatacaactttgtcaagatt
gatatgctggggccatatgttggtggcagggagttagtagatatcattggtgttgttcag
agtgtatcacctaccctgagcatcagaagaaagattgacaatgagtcaatcccaaagcgt
gacattgttgttgcagatgactcgaacaaaactgtcaccatttctctttggaatgatctt
gccaccactgttggtgaggaactcttggacatggttgactctgcacctatcattgcagtg
aagagcctgaaagtatctgactttcaaggtgtgtctgtttctacagtaggcaaaagcaca
cttgtgattaacccagagttgcctgaggctgagaagcttaaagcttggtatgaatctgaa
ggcaagggtactaccttggcatcagttggtgctggaatgggtgcatccaacgctggtggc
ttgagatcaatgtactctgacagagtttttctgtctcacatcacaagtgaccctaacttg
ggccaggacaagcctgttttcttcagcctgtatgccaacataagcaacattaagcctgac
cagaccatgtggtaccgtgcttgcaccacctgcaacaagaaggtgactgaggcgcttgga
tcaggattctggtgtgaagggtgccagaagaactatgagcagtgctcattgaggtacatc
atggtgatcaaggtctctgatcccactggcgaggcctggctgtctcttttcaatgaccaa
gcagagagaattgttggctgcagcgcagatgagcttgatcggatcaggaaagaggagggt
gatgacctgttccagctcaagctgaaggaagccacctggattccccacctgttccgtgtc
agcgtggtgcagaacgagtacatgggtgagaagaggcagaggatcaccgtgaggagtgag
tcgccggtcgactactctgctgaagcaaggtaccagcttgaggagattgccaagctcacc
tccagctag
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