Triticum dicoccoides (wild emmer wheat): 119284940
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Entry
119284940 CDS
T07278
Name
(RefSeq) transcription elongation factor SPT6 homolog
KO
K11292
transcription elongation factor SPT6
Organism
tdc
Triticum dicoccoides (wild emmer wheat)
Brite
KEGG Orthology (KO) [BR:
tdc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tdc03021
]
119284940
03036 Chromosome and associated proteins [BR:
tdc03036
]
119284940
Transcription machinery [BR:
tdc03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription elongation factors
119284940
Chromosome and associated proteins [BR:
tdc03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
Other Histone chaperones and regulators
119284940
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SH2_2
HHH_7
SPT6_acidic
YqgF
Spt6_S1
HTH_44
HHH_9
SH2
Tex_N
HHH_3
Iron_traffic
Motif
Other DBs
NCBI-GeneID:
119284940
NCBI-ProteinID:
XP_037420025
LinkDB
All DBs
Position
1A:517993449..518001555
Genome browser
AA seq
1630 aa
AA seq
DB search
MGRTVVSDDEEDDFIEAEEEDEPRPSRRARDDVDEQDDDEEEEDDDEDEGQNEYEKDGFI
VDDADEDEEEEEEEARASDDERRKKKKKRKKKRETEDFELDEDDYMLLQDNNITGITRPK
PPENKFKRLKKAGRESEMDGRSGFSDHDGAGKSRTAEETVRSSLFGNEEPFEEDFVEEDQ
QVDEDEVGEDDMDDEMGDFIVDEEEIDVNGQVVKRKKVKRKPLRQAAGVSSSALQEAHDI
FGDVDELLALRKQELERDAINSGELRGNRLEDEFEPFILAEKYMTPKDEQIKETDIPERI
QLSEELTGHPIDGEANREEESVWIHNQLTGDGFLSLFSNEQVNREIDQSDIVNVLNMLHT
HKFEVPFIAMYRKESCLSLLKDNDSNEQANEEEKRKMKWHKLLWAVQTLDRKWLLLQKRK
VALQVYYERRYDDEKRRIDDVTRQALNRQLYNSISEALRDAKSEKEVEDVDAKFNLHFPP
GEVEEVGQFKRPKRKSLYSICHKAGLWEVANQFGRSAEQLGQHLTLTRIPEAGELDSGKD
SPEDVAANFTCAMFETPQDVLRGARHMAAVEIGCEPIVKKHIRFIFMNKAVVSTKPTPEG
HLVIDPYHQLSGVKWLHEKPLNKFGDAQWLLIQKAEEEKLLKVTITLPEDAKKALMSEAR
ENYLSDCVSKSAQLWDEQRKMILDDAFLNFLLPSMEKEARSLLTAKAKSFLSMEYGKQFW
DKVSVGPWKKKDADKKDSDIDLDDESELRVMACCWGPGKPATTFVMLDSSGELVDVLYAG
SISLRSQGVAEQQRKRNDQQRVLKFMTDHSPHVVCVGASNLNCRQLKDDIYEVIFKMVED
HPRDVNPQMENFSIVYGDESVPRLYENSRISSDQLPAQSAIVKRAVALGRYLQNPLAMVA
TLCGPGKEILSWKLHPLEQFLTPDEKYEVVEQVMVDATNQIGFDVNLAASHEWHFSTLQF
VAGLGPRKASALQKELVREGSIFSRKELVKPLGRKVFMNASGFLRVRRSGAAAASAQIID
LLEDTRIHPESYALAKNLAKDVCAEDGPEANEMDDDEQEMAIEHVREKQEQLERLDIDEY
SRSIGDDKRETLLDIKLELKCGFSDRRTPYAEPSPDEEFWLLSGETEDNISDGRIVQVTV
RHIQDNRIVCTFDSGLKAIVMGDNYSDDGFDLESLQLHEGDVLTGKIKNVNKNRFIVYLT
CKSSEMKRWPLSRNNHDPYNREQNMVPTQDEKARKQKEAKKHFKPRMIVHPHFQNLTAEE
AMQFLGDKEPGEKVIRPSSRGPSFLTLTLKIFDGVFAHKEITESGKDHKDITSLLRLGKT
LTIGDETFEDLDEVIDRYVDPLVGHLKSMLSYRKFRKGLKGEVDDMLRAEKSENPMRIVY
CFGISHEHPGTFILSYIRSTNPHHEYVGLYPKGFRFRKKDFDSIDRLVSYFQKHIDKPPP
DAGPSMRNVAAMVPMKNSAWGSGGANDGRRGDGDNDRDRPFSGRSGGRFDSRNSSGGRGR
GRGRGRGNFGSDGDGGGGGGWTDNIGSGGGAWGTGGGSGGGDAGWGGGGDSNRGGSGDGV
WGAPAATDGGTGGWGTPAAAAAATTDGGAGGWGAATTPGAAGDDSGWGSAKKAVPAQDSG
GGWGSGGGGW
NT seq
4893 nt
NT seq
+upstream
nt +downstream
nt
atgggacgcacggtggtttccgacgacgaagaggacgacttcatcgaggccgaggaagag
gacgagccgcggccgtcacggagggccagggatgatgtcgacgagcaggacgacgatgag
gaggaggaggacgacgatgaagatgagggacaaaatgagtacgagaaggatggcttcata
gtggatgatgcggatgaagacgaggaggaggaggaagaggaggcaagagctagtgatgat
gaaagacgcaagaagaaaaagaaaagaaagaagaagagagaaacggaggatttcgagctt
gatgaggatgactacatgttgctccaggataataacattaccggcatcactcgtccgaag
cctcctgaaaacaagtttaagcggttgaagaaggcaggacgggaatctgaaatggatggg
cgttctggcttctctgatcatgacggagcaggaaaaagccggactgctgaggagacagtt
cgtagctccttgtttggtaatgaagaaccgtttgaggaagattttgtcgaggaggatcag
caggtagatgaagatgaggttggtgaagatgatatggatgatgaaatgggcgatttcatt
gtggacgaagaggaaatcgatgtgaatggccaagttgtgaaaaggaagaaggttaaaaga
aagcctctgcgacaagctgcaggtgtatcatcatctgcgctacaagaggcccatgatata
tttggggatgttgatgagctattagcactaagaaagcaagagcttgagagggatgctatt
aattctggcgagttgagaggaaacaggcttgaagatgagtttgaaccatttattcttgca
gaaaagtatatgacaccaaaggacgagcagataaaagaaactgatatacctgagaggatc
cagctgtctgaagagttaactggccatcctatagatggcgaggcaaatagagaggaagaa
agtgtatggatacacaaccaactaacgggggatgggtttctgtccctttttagcaatgag
caagtgaacagggagattgatcagagcgacatcgtgaatgtcttgaacatgctacatacc
cacaaatttgaagttccattcattgcaatgtacaggaaggaaagttgcctgagtctgtta
aaagataatgattccaatgaacaagcaaatgaagaagaaaaacgtaaaatgaagtggcat
aagctgctttgggctgttcagaccttagacagaaagtggcttcttcttcagaagcgcaag
gttgctttgcaggtttactatgagagaagatatgatgacgagaaacgaagaatagatgat
gttacaagacaggcacttaatcgacaactctataactctatcagtgaggcactgagggat
gcaaaatcagagaaagaagtggaggatgttgacgcgaaattcaatttacatttccctcct
ggcgaagttgaagaagtaggtcaatttaagcggccaaaaaggaaatccttgtacagtatt
tgtcataaggcagggttgtgggaggttgctaaccaatttggtcggagtgctgagcaatta
ggccagcatctaactttaacgaggatacctgaagcgggtgagcttgacagtggaaaagat
tctcctgaagatgttgctgcaaatttcacatgcgcaatgtttgaaacgccacaagatgtt
cttcggggtgctagacacatggcagcagttgagatcggttgtgagcccattgtaaaaaag
catatcaggtttatcttcatgaataaagcagttgtatcaacaaagcccacacctgagggt
catttggtcatagatccttaccatcaattatcaggtgtgaagtggctgcatgagaaacca
ctaaacaagtttggagatgctcagtggcttcttattcagaaagcagaggaagaaaaactt
ctcaaggttaccataacattgccagaggatgcaaagaaagcgctcatgtctgaggctcgt
gagaattacttaagtgactgtgtcagcaagtctgcacaattgtgggatgagcaacggaag
atgatactggatgatgccttcttgaattttctacttccatcaatggagaaggaagctcga
tcactgttgacagcaaaagccaaaagttttctgtctatggaatatgggaaacagttctgg
gacaaggtttctgttggtccttggaagaagaaggatgcggacaagaaggattcggacatt
gatctggatgatgaatcagagttacgagtaatggcctgctgctggggtcctgggaagcca
gcaaccacatttgtaatgctagactcatcaggagaattggttgatgttctgtatgctggt
tctattagtcttagatctcaaggtgttgctgagcagcagcggaagaggaatgatcagcag
agggttctgaagttcatgaccgaccattcgccacatgttgtgtgtgtaggagcttcaaat
ttgaattgcagacaactcaaggatgatatttatgaggttattttcaaaatggtggaagac
cacccaagagatgtgaacccacaaatggaaaatttcagcattgtctatggtgatgaatct
gtgcctcgcttgtacgagaactctcgaatatcttcagatcagctgcctgcccagtcagct
atcgtgaagcgtgctgtggcgcttggtcggtacttgcaaaatcctttggcgatggttgca
acactctgtggacccgggaaagagatattgtcatggaaactacacccgcttgaacagttc
cttactcctgatgagaagtatgaagttgttgagcaagtaatggtcgatgcaacaaatcag
attggttttgatgttaatcttgctgctagccatgagtggcatttttccactttgcagttt
gttgctggtctgggaccgcgcaaagcttcagctttgcagaaggagttggtaagagaggga
tccatttttagtcgcaaggagctggtgaaacccttaggcaggaaagtattcatgaatgcg
tctgggtttttacgcgtccgacgaagtggtgctgctgcagctagtgcccagatcattgat
cttcttgaggatacaaggatccatcctgaatcatatgcgttggcgaagaatttggccaag
gatgtctgtgctgaggatggacctgaagcgaatgagatggatgatgatgagcaagagatg
gcaattgagcatgtgagagagaagcaggaacagcttgaacgtcttgacatagatgaatac
agcagaagcatcggagatgataagagagaaacattgcttgacataaagttggagctaaag
tgtggtttctctgatcggaggaccccttatgccgagccaagtccagatgaggagttctgg
ttgctttctggtgaaactgaggacaacatatcagatggaaggattgttcaagtaactgtt
cggcatatacaagataaccgaatagtttgcacctttgattctggattgaaagccatagtt
atgggagacaactattctgatgatggctttgatctagaatcactgcagttacatgagggc
gatgtattaactggcaaaattaagaatgtgaacaaaaataggttcatagtttacctaaca
tgcaagagcagtgaaatgaagagatggccactctcgagaaataaccatgatccatacaac
cgtgaacaaaacatggttcctacccaggatgagaaggctcggaaacagaaggaagcaaag
aaacatttcaagccccggatgatcgttcatcctcactttcagaatttgacggcggaagag
gcaatgcagttcttgggggacaaagagcctggcgagaaagtcattcggcctagttctagg
ggcccgtcatttctaacgcttaccctgaagatatttgatggtgtctttgcacacaaggag
atcactgaaagtgggaaggatcataaagatattaccagtttgcttcgactcggaaaaaca
ctgaccattggtgatgaaactttcgaagatcttgatgaggtaatagacagatatgtggat
ccattggtaggccacctgaaaagcatgctctcttatcgcaaattcaggaaagggttaaaa
ggcgaagttgatgatatgttgagggctgagaaatcagagaatcctatgagaatagtctat
tgttttggcatatctcatgaacatccaggcaccttcatattatcttacatcaggagtaca
aacccgcatcatgagtatgttgggttatacccaaagggcttcagattccggaagaaagat
tttgacagcattgatcgccttgtgtcatattttcaaaaacatattgacaaaccaccacct
gatgctggcccttcaatgcgaaatgttgcggcaatggtacctatgaaaaattcagcttgg
ggttctggtggcgcgaatgacggaaggaggggagatggtgataatgatagggacagacct
ttttctggaagatcaggaggcaggtttgattcaaggaacagttctggcggccgtggacgt
gggcgtggtcggggtcgaggtaactttggcagtgatggtgatggtggcggtggtggagga
tggactgataacataggcagtgggggaggtgcgtggggcactggcggaggatctggaggc
ggggatgctggatggggtggtgggggcgacagcaaccgtggcggcagtggggatggagtc
tggggcgcacctgctgccactgacggtggcactggaggctggggtacacctgctgctgct
gctgctgccactactgacggtggcgccggaggctggggagcagccactacacctggtgct
gctggtgacgactcaggatggggcagcgccaagaaggccgtcccagctcaggactccgga
ggtgggtgggggtctggcggtgggggctggtga
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integrated database retrieval system
