Triticum dicoccoides (wild emmer wheat): 119285212
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Entry
119285212 CDS
T07278
Name
(RefSeq) coronatine-insensitive protein homolog 2-like
KO
K13463
coronatine-insensitive protein 1
Organism
tdc
Triticum dicoccoides (wild emmer wheat)
Pathway
tdc04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
tdc00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
119285212
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
tdc04121
]
119285212
Ubiquitin system [BR:
tdc04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
119285212
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Gene cluster
GFIT
Motif
Pfam:
Transp_inhibit
F-box_5
LRR_4
LRR_At5g56370
F-box-like
Motif
Other DBs
NCBI-GeneID:
119285212
NCBI-ProteinID:
XP_037420341
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Position
4A:98936555..98939446
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AA seq
586 aa
AA seq
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MGGDGRHLGRTMSFGIPDVALGLVMGCVEDPWDRDAISLVCRHWCKVDALSRKHVTVAMA
YSTTPDRLFRRFPCLESLKLKAKPRASMFNLIPEDWGGSASPWIRELSASFHFLKVLHLR
RMIVSDDDVAVLVRAKAHMLVSLKLDRCSGFSTSSLALLARCCKKLETLFLEESSVAEKE
NDEWLRELATSNTVLETLNFFLTDLRASPAHLLLLVRNCRRLKTLKISDCFMSDLVDLFR
TAETLQDFAGGSFDDQDQGGNYANYYFPPSVQHLSFLYMGTNEMQILFPYGATLKKLDLQ
FTFLTTEDHCQLVQRCPNLEVLEVRDVIGDRGLEVIARTCKKLQRLRVERGDDDQGGLED
EQGRVTQVGLMAVAEGCPDLEYWAVHVSDITNAALEAIGAFSKNLNDFRLVLLDREVHIT
ELPLDNGVRALLRGCTKLRRFAFYVRPGALSDIGLSYVGEFSKTVRYMLLGNAGGSDDGL
LAFARGCPSLQKLELRSCCFSERALAVAALQLKSLRYLWVQGYKASPTGTDLMAMVRPFW
NIEFIAPNQDEPCPEGQAQILAYYSLAGARTDCPQSVIPLHPSVGS
NT seq
1761 nt
NT seq
+upstream
nt +downstream
nt
atgggcggcgacgggcggcacctggggaggaccatgagcttcgggatcccggacgtggcg
ctggggctggtcatggggtgcgtggaggacccctgggaccgcgacgccatctcgctcgtc
tgccgccactggtgcaaggtcgacgcgctcagccgcaagcacgtcaccgtcgccatggcc
tactccaccacccccgaccgcctcttccgccgcttcccctgcctcgagtcgctcaagctc
aaggccaagccccgcgcctccatgttcaacctcatccccgaggactggggaggctccgcc
tcgccctggatccgcgagctctccgcctccttccacttcctcaaggtgctgcacctccgc
cggatgattgtctccgacgacgacgttgccgtgctcgtgcgcgccaaggcccacatgctc
gtctccctcaagcttgaccgctgctccggcttctccacctcctccctcgctctcctcgcc
cgctgctgcaagaaactggaaacgttgtttcttgaagaaagttctgttgctgagaaagaa
aatgatgaatggctccgtgagcttgctaccagcaatactgtccttgagacgctgaatttc
tttctgacggatctcagggcatcccctgcacatcttctcctccttgtgcgaaattgccga
aggctgaaaactctcaagattagcgactgtttcatgtctgacctggtcgacctgttccgt
acagcagaaacactacaagactttgctggtggttcctttgatgatcaagatcaaggtggg
aattatgctaactactatttccctccttcagtacagcacttgagttttctctacatggga
acaaatgagatgcagatattatttccatatggtgccacactcaagaagttggaccttcag
ttcacattccttaccacagaggatcactgtcaattagtccagcgctgcccaaatctagaa
gttttggaggtgagggatgtgataggagatcgagggttagaagttattgcgcggacctgc
aagaaattacagcgactcagagtcgagagaggagatgatgaccaaggaggtcttgaggac
gaacagggtagagtgacacaagtaggattgatggctgtagctgaaggctgtcctgatttg
gagtactgggcagtacatgtgtctgacattacaaatgcagctcttgaggctattggcgca
ttcagcaaaaacctgaacgatttccgacttgtcctgcttgatagagaggtgcatataact
gaactgccccttgacaacggggttcgggctttgctgagaggttgcaccaaactccggagg
tttgcattttatgtgagacctggagctctatcagatattggcctttcttatgttggcgaa
tttagcaagaccgtccgctacatgttgcttgggaatgccggggggtctgatgatggactg
ctggcatttgcacgaggatgcccaagcttgcagaaattggagctaaggagttgctgcttt
agtgaacgtgcattggcagttgcagccttacagctgaagtcactcagatatctttgggtg
cagggatacaaggcatctcctactggcaccgatctcatggcaatggtacgccccttctgg
aacattgagtttattgcaccaaatcaagatgagccttgcccagagggtcaggcacagatt
ctggcatactactctctggctggggcaaggacagattgtcctcagtcagtaattcccctc
catccgtcagtgggaagctaa
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