Triticum dicoccoides (wild emmer wheat): 119285263
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Entry
119285263 CDS
T07278
Name
(RefSeq) E3 ubiquitin-protein ligase RDUF2-like
KO
K11982
E3 ubiquitin-protein ligase RNF115/126 [EC:
2.3.2.27
]
Organism
tdc
Triticum dicoccoides (wild emmer wheat)
Brite
KEGG Orthology (KO) [BR:
tdc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tdc04131
]
119285263
04121 Ubiquitin system [BR:
tdc04121
]
119285263
Enzymes [BR:
tdc01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
119285263
Membrane trafficking [BR:
tdc04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Rab associated proteins
119285263
Ubiquitin system [BR:
tdc04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
119285263
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF1117
zf-RING_2
Zn_ribbon_19
zf-C3HC4_2
zf-RING_11
zf-C3HC4
zf-rbx1
zf-RING_UBOX
zf-RING_5
zf-C3HC4_3
zf-ANAPC11
Prok-RING_1
zf-RING_16
HypA
DUF7129
DUF1272
zf_RING_Vps8_fungal
Motif
Other DBs
NCBI-GeneID:
119285263
NCBI-ProteinID:
XP_037420399
LinkDB
All DBs
Position
4A:104649362..104650815
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AA seq
280 aa
AA seq
DB search
MASSPVSYWCYHCSRFVRVSPATVVCPDCDGGFLEQFPHPPPPRGGGGSGRRGAMNPVIV
LRGGSLSGFELYYEDGSGDGLRPLPGDVSHLLMGSGFHRLLDQFSRLEAAAPRPPASKAA
VESMPSVTVAGGGGAHCAVCQEAFEPGAAAREMPCKHVYHQDCILPWLSLRNSCPICRSE
LPAAAVPEAEADAGLTIWRLPRGGFAVGRFAGGPREQLPVVYTELDGGFSNGVGPRRVTW
PEGEGQVDGGEGRIRRVFRNLFGCFGRGGRPESSSQSRSG
NT seq
843 nt
NT seq
+upstream
nt +downstream
nt
atggcgtcgtccccggtctcctactggtgctaccactgcagccgcttcgtgcgggtctcc
ccggccaccgtcgtctgccccgactgcgacggcggcttcctcgagcagttcccgcacccg
ccgccgccgcgcggcggcggcggcagcggccggcgcggggccatgaaccccgtgatcgtg
ctgcggggcggctcgctctccggcttcgagctctactacgaggacggctccggcgacggg
ctgcggccgctgcccggcgacgtctcgcacctcctcatggggtccggcttccaccgcctg
ctcgaccagttctcgcggctggaggcggccgcgccgcgcccgccggcctccaaggccgcg
gtcgagtcgatgccttccgtgaccgtcgccgggggaggcggggcccactgcgcggtgtgc
caggaggccttcgagcccggcgccgcggcccgggagatgccgtgcaagcacgtctaccac
caggactgcatcctcccctggctctccctccgcaactcctgccccatctgccgcagcgag
cttccggcggcggccgtgcctgaggcggaggcggacgccgggctcaccatctggcgactc
ccccgcggcggatttgccgtcggaaggttcgccggcgggcccagagagcaactgccggtt
gtctacacggagctggatggtggtttcagcaacggcgtcgggccgaggcgggtgacatgg
ccagaaggagaagggcaggtggacggcggcgaaggtcggattcgccgtgtatttaggaac
ctgtttgggtgctttggccggggcggccggcccgagagttcctcgcagtcccgtagtggc
tga
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