Triticum dicoccoides (wild emmer wheat): 119285499
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Entry
119285499 CDS
T07278
Name
(RefSeq) phytochrome B
KO
K12121
phytochrome B
Organism
tdc
Triticum dicoccoides (wild emmer wheat)
Pathway
tdc04712
Circadian rhythm - plant
Brite
KEGG Orthology (KO) [BR:
tdc00001
]
09150 Organismal Systems
09159 Environmental adaptation
04712 Circadian rhythm - plant
119285499
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Motif
Pfam:
PHY
PAS
PAS_2
GAF
HATPase_c
HisKA
PAS_4
PAS_9
PAS_3
PAS_8
Motif
Other DBs
NCBI-GeneID:
119285499
NCBI-ProteinID:
XP_037420686
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All DBs
Position
4A:complement(155974135..155982204)
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AA seq
1166 aa
AA seq
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MASGSRATPTRSPSSARPAAPHQNHTQSSGGSTSRAGGGGGGAAGSAAATESVSKAVAQY
TLDAGLHAVFEQSGASGRSFDYSQSLLAPPTPSSEQQIAAYLSRIQRGGHIQPFGCTLAV
ADDSSFRLLAFSENAADLLDLSPHHSVPSLDSSAAPPPVSLGADARLLFSPSSGVLLERA
FAAREISLLNPLWIHSRVSSKPFYAILHRIDVGVVIDLEPARTEDPALSIAGAVQSQKLA
VRAISRLQALPGGDVKLLCDTVVEHVRELTGYDRVMVYKFHDDEHGEVLAESRRGDLEPY
LGLHYPATDIPQASRFLFRQNRVRMIADCHAAAVRVIQDPAMPQPLCLVGSTLRSPHGCH
AQYMANMGSIASLVMAVIISSGGEDEHNMTRGVIPSAMKLWGLVVCHHTSPRCIPFPLRY
ACEFLMQAFGLQLNMELQLAHQLSEKHILRTQTLLCDMLLRDSPTGIVTQSPSIMDLVKC
DGAALFYHGKYYPLGVTPTEAQIKDIIEWLTVCHGDSTGLSTDSLADAGYPGATALGDAV
CGMAVAYITPSDYLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRS
LPWENAEMDAIHSLQLILRDSFRDAGEGTSNSKAIVNGQVQLGELELRGIDELSSVAREM
VRLIETATVPIFAVDTYGCINGWNAKVAELTGLTVEEAMGKSLVKDLIFKESEEIVEKLL
SQALKGEEGTNVEIKLKTFGSEQSKGPIFVIVNACSSRDYTKSIVGVCFVGQDITGQKVV
MDKFVNIQGDYKAIVHNPNPLIPPIFASDENICCSEWNTAMEKLTGWSRGEVVGKLLVGE
VFGNCCRLKGPDALTKFMIVLHNAIGGQDSEKSPFSFFDKNGKYVQALLTANTRSKMDGE
TIGAFCFLQIASPELQQAFEIQRQQEKKCYARMKELAYICQEIKNPLSGIRFTNSLLEMT
DLKDDQRQFLETSAACEKQMSKIVKDASLQSIEDGSLVLEKGEFSLGNVMNAVVSQVMIL
LRERDLQLIRDIPDEIKEASAYGDQYRIQQVLSDFLLSMVRFAPTENGWVEIQVRPNVKQ
NSDGTETMLFLFRFACPGEGLPPDIVQDMFSNARWTTQEGIGLSVCRKILKLMGGEVQYI
RESERSFFLIVLELPQPLRSESRDRS
NT seq
3501 nt
NT seq
+upstream
nt +downstream
nt
atggcctcgggaagccgcgccacgcccacgcgctccccctcctccgcgcggcccgccgcg
ccgcaccagaatcacacgcagtcctcgggcgggagcacctcccgcgcgggagggggaggg
ggaggcgcggccgggagcgcggccgccacggagtcggtctccaaggccgtggcgcagtac
accctggacgccggcctccacgcggtgttcgagcagtcgggcgcgtcggggcgcagcttc
gactactctcagtcgctgctcgcgccgcccactccctcctccgagcagcagatcgccgcc
tacctctcccgcatccagcgcggcggccacatccagcccttcggctgcacgctcgccgtc
gccgacgactcctccttccgcctcctcgccttctccgagaacgccgccgacctgctcgac
ctatcgcctcaccactccgtcccgtcgctcgactcctccgcggcgcctccccccgtttct
ctcggcgccgacgcgcgcctcctcttctctccctcctccggcgtcctccttgagcgcgcc
ttcgccgcacgggagatctcgctgctcaacccgctctggatccactccagggtctcatcc
aagcccttctacgccatcctccaccgcatcgacgtcggcgtcgtcatcgacctcgagccc
gcccgcaccgaggaccccgccctctccatcgctggcgcagttcagtcccagaagctcgcc
gtccgcgccatctcccgtctccaggcgctccctggcggggacgtcaagctcctctgcgac
accgtcgtggagcacgtccgtgagctcacgggctatgaccgcgtcatggtgtacaaattc
cacgatgatgagcatggggaagtcctcgccgagagccggcgtggtgacctcgagccctac
ctcggtttgcattatcctgccactgatatcccgcaggcatcacgcttcctgttccggcaa
aaccgtgtgcggatgattgctgattgccacgcagctgcggtgagggtcatccaggaccct
gcaatgccacagccgctgtgcttagttgggtcgactcttcgctccccacatgggtgccat
gcgcagtacatggcaaacatggggtcgattgcatctctcgtcatggcagtgatcatcagt
agcggtggggaagatgagcacaacatgacgcggggcgtcatcccgtcggcgatgaagttg
tgggggttagtggtgtgccaccacacatctccacggtgcatccctttcccactgcggtat
gcatgtgagttcctcatgcaggcctttgggctgcaactcaacatggagctgcagcttgcg
caccaactatcagagaaacatattctcagaacacagacgttactgtgcgacatgctactc
cgggattcacctactggcattgtcacacagagcccaagcataatggaccttgtgaagtgt
gatggtgctgcactgttttaccacgggaagtactacccacttggtgtcacccccacagag
gctcagattaaggatatcatcgagtggttgacggtgtgccatggagactccacagggctc
agcacagatagcctggctgatgcaggctaccccggtgctactgcattaggggatgcagtg
tgcggaatggcagtagcttatatcacgccgagtgattatttgttttggttccggtcacac
acagccaaggagataaaatggggtggtgcaaagcatcatccggaggataaggatgatggg
cagcggatgcacccgcgatcatcattcaaggcatttcttgaagtggtgaagagtaggagc
ttaccttgggagaatgctgagatggatgcaatacattccttgcagctcatattgcgggac
tccttcagagatgcaggagagggcactagtaactcaaaagccattgtcaatggtcaggtt
cagcttggggaactagagttgcggggaatagatgagctgagttcagtagcaagggagatg
gttcggttgatcgagacggctacagtacccatctttgcagttgatacttatggatgtata
aatgggtggaatgcaaaggttgctgagttgactggcctcacagttgaagaagctatgggc
aaatcattagttaaagatcttatcttcaaggaatctgaagaaatagttgagaagctactc
tcgcaagctttaaaaggtgaagaaggcacaaatgtagagattaagttgaagacatttggg
tcagagcaatctaaaggaccaatttttgttattgtcaacgcctgctctagtagggattac
accaaaagtattgttggtgtttgttttgtcggccaagatatcacagggcaaaaggtggtc
atggataaatttgtcaacatacaaggggattacaaggctattgtacacaatcccaatcct
ctaataccgccaatatttgcttcagatgagaacatatgttgctccgaatggaatacggcg
atggaaaaactcacaggatggtcgagaggagaagttgttggtaagcttctggttggggag
gtatttggaaattgttgccgacttaagggcccagatgcactgacaaagttcatgattgtc
cttcacaacgctataggagggcaggattctgagaagtcccccttttcattctttgacaag
aatggtaaatatgtacaggccttgttgactgcaaacacaaggagcaaaatggatggtgag
accataggtgccttctgcttcttgcagattgcaagccctgaattacagcaagcctttgag
attcagagacaacaagaaaagaagtgttatgccaggatgaaggagttggcttacatttgc
caggagataaaaaaccctctcagtggtatacggtttacaaactccctgttagagatgact
gatttaaaggatgaccagaggcagtttcttgaaactagcgctgcttgtgagaagcagatg
tccaagattgtaaaggatgccagcctccaaagtattgaggacggctctttggtgcttgag
aaaggtgaattttcacttggaaatgttatgaacgctgttgtcagccaagtgatgatattg
ctaagagaaagagatttgcaacttattcgagatatccctgatgaaataaaagaagcctcg
gcatatggtgaccaatatagaatccagcaagttttgtctgactttttgcttagcatggtc
cggtttgctccaactgaaaatggctgggtggagatacaagtcagaccaaacgtaaaacaa
aattctgatggaacggaaacaatgctcttcctcttcagatttgcctgtcctggtgagggc
ctcccccctgacattgtccaagatatgttcagtaacgcccgttggacgacccaagaaggc
attggactaagcgtatgcaggaaaatcctcaaattgatgggtggtgaggtgcagtacatc
agagagtcagagcggagtttcttcctcattgtgcttgagctaccccagcctctgcgatca
gaaagtagggatcggagctga
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