Triticum dicoccoides (wild emmer wheat): 119285520
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Entry
119285520 CDS
T07278
Name
(RefSeq) PH-interacting protein-like
KO
K11797
PH-interacting protein
Organism
tdc
Triticum dicoccoides (wild emmer wheat)
Brite
KEGG Orthology (KO) [BR:
tdc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
tdc04121
]
119285520
Ubiquitin system [BR:
tdc04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
119285520
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_WDHD1_1st
WD40_CDC20-Fz
EIF3I
Beta-prop_EML_2
Beta-prop_TEP1_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_WDR75_1st
Beta-prop_EML
WDR55
WD40_MABP1-WDR62_2nd
Beta-prop_SCAP
Beta-prop_WDR90_POC16_2nd
NBCH_WD40
Beta-prop_RIG_2nd
Beta-prop_IFT122_1st
WD40_MABP1-WDR62_1st
Beta-prop_WDR35_TULP_N
Beta-prop_DCAF4
VPS8_N
Beta-prop_HPS5
Motif
Other DBs
NCBI-GeneID:
119285520
NCBI-ProteinID:
XP_037420709
LinkDB
All DBs
Position
4A:159880534..159897163
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AA seq
1514 aa
AA seq
DB search
MDFRKHQPSANATSISMVHLDFPSQMLEDIDSVNQVMPADFPSEAPIDIDMRELYFLILH
FLSHGPFKRVAGELCNELLEHQLLPRRYHAWYSRGGFHSGEENDDGVSLPLGYLKLVERY
PHIGKDHLVKLLKQLMMTSCCPDSLVRDVSPNAADFPTLLGSNSFSLLASDRCRQDKETL
RLPRYLRWSHIHADQVHGLSLREIGGFTKNHRAPSVRASCYAIAKPSTLVEKMQIIKKLR
GHQNAAYCATFDRSGRYVITGSDDRLVKIWAMETAFCLASCRGHEGDITDLAVSSNNAVV
ASSSNDFIIRVWRIPDGMPMSVLKGHTGVVTTIAFSPRPGAAFQLLSSSDDGTCRIWDAR
HSQQSPRIYIPKPSDVAAGKSGDASSSAVQVQPTNHQILCCSFNANGTVFVTGSSDTYAR
VWSACKSCSDEHDQPNHEMDILSGHENDVNYVQFSGCIVSRSFSSDSSHTSKEENNLKLR
NSWFTHNIVTCSRDGSAIIWVPRSRRSHGKIGRWTRAYHLKVPPPPMAPQPLRGGPRQRY
NPTPRGVNMIVWSLDNRFVLAAIMDCRICVWNASDGSLVHSLISHQESTFVLDVHPFNPR
IGMSAGYDGKTIIWDIWEGKPVQIYETGHYKLVDGKFSPDGTSLVLTDEIGQIFIIGTGQ
GKSQKDAKYDQFFLGDYRPLVHDTNGSAIDQETQLAPYRRNIQDLLCDSGMIPYPEPFQS
MYQKHRLGTLGIEWRPPSVNFAVGPTYHATTGEYQIISVIDPDRWEPLPEITDFIELEPE
NEAISDDTDSEYNGMDDYSSEGEQEIWGGHASGASYSSAEIDGSNLNSTANLRRSRRKKK
RSDADFVTSSDRRVKKRNLDGHGVATPSRPHRGRKSKTGRATKRKISPKSRRLRPQRRAT
HSTHSFFSKIETSTEEEDGSASSLSDNELNTESTEAEQSAWHGLPRLGRETNQYDSEYVT
PSQFTETKGKNSANSRKLILRIPCRDLKVQFPSESANPELPPHYAVLSLPAARYKDAELE
LAFEPGNSSACKSESPLVSVLHDAGTAHSNDTIKGGELKLRPSKHCKFGDSSSGDMWVSS
NNALSHDVYGSGCQKTPNQYDNGVQQRVEQNVQKRQRAIYLDSIHENHNTDDYREGNLPG
KEWITDNKNTHLEEENNREHGQQFHSTRSISFKLKLSRPRGFADGASSSDISKTSAVGSD
INHVKVSMQHDEVSATSQHRSSDFTSVSRRFQDFESANTYGTVCKRSEPSKHRKRLGSDA
FGNGHSTSVSNDDGGHQPLDCSPVALTGSLRRNERRSCAYTDYGRERDAISHVQSSSLEA
AISGRRIVANVREVMWGSTSKNAGIKSCMNKGESCNFPDTHLLEKKHQVSRPWLMLLEHE
DIYRYIPQLGDEVMYLRQGHEEYVYKVQSSDNCPLNRIRGLKAAELCKIKGLDYKPDRGS
GESCCELTIKFIDHTSSGFGKEFVITLRELVTFPDFLVERTRFEATTTYNWSIADRCKVW
WMDEGEDGGSWWEG
NT seq
4545 nt
NT seq
+upstream
nt +downstream
nt
atggattttcgaaagcatcaaccttctgctaatgcaacctctattagtatggtccacctg
gattttcctagccaaatgcttgaggatattgattctgtgaatcaagtgatgccagcagat
tttccatcggaggctcctattgatattgatatgagggaactttactttctaattttgcat
tttttatcacatggtccatttaagcgggtcgctggagagctgtgcaatgaacttctggag
catcaattgttacctagaagatatcatgcttggtattcgcgtggtggttttcatagcggc
gaagaaaatgacgatggtgtatcactccctttgggttacctaaagctagttgagagatac
cctcatattggtaaagaccacttggtgaagctgttaaagcaactgatgatgacttcctgc
tgcccagacagcttggttagagatgtgtctccaaatgctgctgattttccaacacttctt
ggctccaactccttttcccttcttgcatctgataggtgcaggcaagataaggaaaccctc
aggctgccgaggtatctccggtggtcacacatacatgctgatcaagttcatggtttaagt
ttgagggagattggtggtttcactaagaatcatcgagctccttctgtacgtgcatcatgc
tatgccattgcaaagccatctacccttgttgaaaagatgcagattataaagaaattgagg
ggacatcagaatgccgcgtattgtgctacttttgaccgctcaggacgttatgttattact
ggttctgatgaccgccttgtcaaaatttgggcgatggaaacagcattttgtctggctagt
tgccgaggccatgaaggtgatattactgacctcgctgtgagttccaataatgctgtggta
gcatcttcctccaatgatttcattattagagtgtggcgcatacctgacggcatgccaatg
tcagtgttgaagggccatactggggttgtaacaactattgcatttagtccaaggccaggt
gctgctttccagctattgtcatcatctgatgatgggacatgcaggatttgggatgctaga
cattctcaacaatctccacgaatatatataccaaaaccttcagatgttgccgctgggaag
agtggtgatgcatcttccagtgctgttcaagttcaaccaacaaatcaccaaatcttatgt
tgttcattcaatgctaatggaactgtgtttgttactggcagttcagacacttatgcgagg
gtgtggagtgcttgcaagagttgttctgacgaacatgaccaaccgaatcatgagatggac
atattatcaggtcatgaaaatgatgtaaactacgtgcagtttagtggatgtattgtatca
agatccttttcgtctgacagcagtcacaccagtaaggaagaaaataaccttaagctaaga
aattcatggttcacacataatattgttacctgctcccgtgatggcagcgcaattatatgg
gttccgcggtctcggagatcacatggaaagattggacgctggacacgcgcttaccatctc
aaggttcctccacccccaatggctcctcaaccacttcgcggtggtccacgtcaaagatac
aatccaactcctcgtggtgtgaatatgattgtttggagtttggacaaccgctttgtgctt
gctgctatcatggattgcagaatttgtgtttggaatgcttctgatgggagcttggtgcat
tcactgattagccatcaggaatcaacatttgttcttgatgtgcatccgttcaacccccgt
ataggtatgagtgctgggtatgatggaaagacaataatctgggatatatgggaaggaaag
cctgtacagatctacgaaactggccactataagcttgttgacggcaagttctctccggat
ggaacatcacttgtcctcaccgatgaaattgggcaaatattcattattggtacagggcag
ggcaagtcccaaaaggatgcgaaatatgatcagttctttcttggagactacaggcccctt
gttcatgatacaaatggaagtgctattgatcaggaaacacaacttgcaccttataggaga
aatattcaagaccttttgtgcgactcgggtatgataccttacccagagccttttcagagc
atgtaccagaaacacaggttaggtaccctgggtattgaatggcgacctccctcggtaaat
tttgctgttgggcccacttaccatgcaaccactggcgagtaccaaatcatctcagttatt
gatccagataggtgggaaccacttccagagataacagacttcatcgagcttgaaccagaa
aatgaagcgatctctgatgatactgattccgagtacaatggcatggatgactattctagt
gaaggagaacaggagatttggggtggtcatgcttctggtgcttcatactcaagtgcagag
attgatggatctaatcttaacagtactgctaatctccgcagatctagaagaaagaagaaa
agatctgatgctgattttgttacttcatctgatcggcgagttaagaaaagaaatttggat
gggcatggtgtggctacaccgtcaaggccacatagaggtaggaagtctaagactggccgt
gctaccaaaaggaaaatatctcctaaatctaggagattgcgacctcaaagacgtgctact
cacagcacacacagttttttctcgaagattgaaacttcaacagaagaggaagatggatca
gcgagcagtctttcagacaacgaactgaacacagaaagcactgaagctgagcagtcagcg
tggcatggcctgccaagacttggtagagagaccaaccaatatgattccgaatatgttacc
ccttctcagttcactgaaaccaagggaaaaaattctgcaaatagtagaaaactgattctg
aggataccatgccgtgatctaaaagttcagtttccttcagaaagtgcaaatccagaactc
ccacctcattatgcagtgctgtcacttccagcagccagatacaaagacgctgagctggaa
ctagcttttgagcctggaaactcctctgcttgcaagtctgaatcacctctggtctctgtt
ctacatgacgcgggtactgctcacagtaatgacacaatcaaagggggtgagcttaagctg
cgaccttcaaagcattgcaagttcggggactcttcttcaggagacatgtgggtctcttca
aataatgcactttcacatgacgtttatgggtctggttgtcagaaaacacctaatcaatat
gataatggcgtccaacaaagggttgagcagaatgtacagaaaagacaacgtgcaatttat
ctggatagcatccatgaaaaccacaatactgatgattatcgtgaaggtaatttgcctggt
aaagaatggataactgacaacaagaatactcatctagaggaagaaaataacagggaacac
ggtcagcagttccacagcactcggtctatatcctttaaactgaagttgtccagaccaaga
ggctttgcagatggagcaagttcatcagacatatcgaagactagtgcagtagggagtgac
atcaaccatgttaaagtttccatgcagcatgatgaggtttctgccaccagtcaacatagg
agtagtgacttcactagtgtgtccagacgtttccaggactttgaatctgcgaacacatac
ggcacagtgtgcaaaaggtcagagccaagtaagcacaggaaaagattgggttcggatgcc
tttggaaatggacatagtacttctgtttccaatgatgatggtgggcatcaacctctagac
tgcagtcctgttgcacttactggtagtttacgaagaaacgaaaggaggtcatgtgcatac
actgattatggtagagaaagggatgcaatctctcatgtgcaaagttcttccctcgaagca
gcaattagtgggagacgaattgttgcaaatgtgcgtgaagtaatgtggggatcaacatca
aagaatgctggtataaagtcttgtatgaacaaaggagagagttgcaactttcctgataca
catctattggagaaaaagcaccaagtatcgaggccgtggttgatgttgctagagcatgaa
gatatctaccgttatattcctcaacttggcgatgaggttatgtacttgcgacagggccat
gaagaatatgtttataaagtgcaatcatcggataattgcccattgaatcggatcagaggc
cttaaagctgccgagctttgcaaaattaagggtcttgattacaagccagatagagggtct
ggggaaagctgctgtgaattaactattaaattcattgatcacacttcaagcggatttggc
aaagagtttgtaatcacattgcgtgagctagttacgttccctgattttcttgtggaaaga
acacggtttgaagctactaccacgtataactggagcatcgctgataggtgcaaagtttgg
tggatggatgagggagaggatggaggaagttggtgggagggatga
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integrated database retrieval system