Triticum dicoccoides (wild emmer wheat): 119285627
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Entry
119285627 CDS
T07278
Name
(RefSeq) putative tRNA pseudouridine synthase isoform X1
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
tdc
Triticum dicoccoides (wild emmer wheat)
Brite
KEGG Orthology (KO) [BR:
tdc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
tdc03016
]
119285627
Enzymes [BR:
tdc01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
119285627
Transfer RNA biogenesis [BR:
tdc03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
119285627
Prokaryotic type
119285627
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_1
Motif
Other DBs
NCBI-GeneID:
119285627
NCBI-ProteinID:
XP_037420857
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All DBs
Position
4A:193520663..193529151
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AA seq
526 aa
AA seq
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MAAAAAAATTSSWLLWRPFSSTIFTRCTNPRFLRTTLCFSHSASAPALGAASLQPTPPHA
PPTTCSSDGGGGMRWESTRKKRVVLRVGYVGSEYRGLQKQRDLSADSTIESVLESAIFKA
GGILESNYGKLQKVGWERSSRTDKGVHSLATMISLKMEIPDRAWEKDPDGIALANFINSN
LPDNIKVFSILPAQRSFDVRRECLYREYFYLLPAEIIGIKSSCSSGEVEEHLIEFNNILK
CFEGNHPFHNYTARAKYRKVLAGAHRRAKETSTTAHSIPSEMVADKSTSGDGTTSDIDEE
YLNSPSILDSSAPEDNCNMDNPELPESHVQIQARWLHEPNDNDRLSASHFRDILTCSCGE
LRSSSGVQFVELMICGASFMLHQIRKMVGTAVAVKRGLLPKDIIELSLAKFSRIVLPIAP
SEVLILRDNSFCTRNKYGSIVRPGIQSINESEEIKKGVMEFYKAALVPELAKFLDASLPP
WQEWVENLDHFTSIPDPQLDEVRTAYRAWKDDYDRVKMARKNTGSG
NT seq
1581 nt
NT seq
+upstream
nt +downstream
nt
atggccgccgccgccgccgccgccacgacgtcgtcgtggcttctctggagacccttctct
tccactatcttcacacggtgcactaaccctaggttcctccgtaccaccctatgcttctcg
cactctgcctccgcccccgccctcggcgccgcctctctacagccaaccccgcctcatgct
cctcctacaacctgctccagcgatggaggtggcgggatgaggtgggagtctacgcgcaag
aagagggtcgtgctccgcgtcggctacgtcggcagcgagtaccgaggtcttcagaagcag
cgagatctcagcgcggattcaaccattgagtcagttttggaatctgccatcttcaaggca
gggggcattcttgagagtaattatggaaagttgcaaaaagttggttgggaaaggagcagc
cgaactgataaaggggtacattcactggctacaatgatctctcttaagatggaaatccct
gatcgagcatgggagaaggatcctgatggcattgctcttgcgaactttattaactcaaat
ttaccagataatatcaaagttttcagtatcttgcctgctcaaaggagttttgatgtaaga
agggaatgcttgtaccgggagtacttctatcttctgcctgctgaaataattggaattaaa
agcagttgtagctctggagaagtggaggagcacttaattgaattcaataacatactgaaa
tgttttgagggaaaccacccatttcataattacactgctcgtgcgaagtatagaaaagtt
ctagctggagcacaccgaagggccaaagaaacaagcacaacagcgcattccatcccctcc
gaaatggttgcggacaaaagcacttctggagatggaaccacttctgatatagatgaggaa
tacttaaactctccatcaatacttgattctagtgcaccagaagataattgtaatatggat
aatcctgaacttcctgagagtcatgtgcaaattcaagctagatggctccatgagcctaat
gacaatgacagactaagtgcatcacacttcagagatatcctcacctgctcatgtggagag
ttgcggagttcatcaggagttcaatttgtggaactgatgatatgtggagcatcttttatg
ctacatcagatccggaaaatggttggtaccgcggtggcagtgaagcgtggattactaccc
aaagatattatagaactttcgcttgcaaagttttctcgcatcgttttaccaatcgcccca
tccgaagttctgatcctcagagataacagtttctgcacaaggaacaagtacgggagtatt
gttcggcctggcatccagtcaattaatgaatctgaagaaatcaagaagggtgtaatggaa
ttctacaaggcggctcttgtgcctgagctagcaaaattcctggatgcatcccttcctccg
tggcaagaatgggtggagaacttggaccacttcaccagtataccagatcctcagctggat
gaagttaggacagcttatagagcatggaaagacgattacgaccgggtaaaaatggctcga
aagaatactggcagtggctaa
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