Triticum dicoccoides (wild emmer wheat): 119285679
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Entry
119285679 CDS
T07278
Name
(RefSeq) nuclear pore complex protein NUP93A-like isoform X1
KO
K14309
nuclear pore complex protein Nup93
Organism
tdc
Triticum dicoccoides (wild emmer wheat)
Pathway
tdc03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
tdc00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
119285679
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tdc03019
]
119285679
Messenger RNA biogenesis [BR:
tdc03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
119285679
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nic96
TPR_14
TPR_2
TPR_12
TPR_8
TPR_1
PHD_like
TPR_16
Clathrin
Motif
Other DBs
NCBI-GeneID:
119285679
NCBI-ProteinID:
XP_037420914
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All DBs
Position
4A:219463213..219478952
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AA seq
868 aa
AA seq
DB search
MAGVGADGGGDTEMGGWSELLNISTKLLEQAAPTPHFPTLQRNLDQLEVLSTKLKAKTIR
AEAPSQSLSATRLLAREGINAEQLTRDLKSFELKTTFEDVFPSEATSVEEYLQQLHEMAI
VSSIQGAQKDNLQSFNNYMMQVLEDDWQKEKRDFLQSLSRLSTLPKRNTNLAGGLSRYAL
MPSSASSPQASSGLPAAEVMPIPNKTIIDSKSSVYAGVVKDLNDARGRSLPFSPATAFRA
AYESLSLDATGSKSVTMQKVWHLIQALVGEGSTHKNVSRKMSLVVGARRHLEWGHEKYII
ETINSQPALAALGGSVGNLQKIRAFLRVRLRDHGVLDFDASDLRRQPPVDTTWQQIYFCL
RTGYYDEARQVAQSSRAAYNFAPLLAEWITTNGAVSLETALTASEECEKMLRMGDRPGRP
GYDRKKLLLYAIICGCRRQIDRLLKDLPTLFNTIEDFLWFKLSALREYSSASSSNVANEG
LVPYMLEDLQNYLNKFEPSYYTKSGKDPLVYPYILLLSIQSLPAILYLSKEVGEEGYHVD
AVHISITLADHGILPEGVGSGQKMGVMDACAEAASIIRQYGSIYLRNGNLDLALEYYAQA
AAAMGGGEVSWIGQGNADQQRQRSSMLMQLLTEILLRDGGIQLLLGPSGMGEEGELKKYM
MDLRSRQQFLLEAAHRCQEAGLYDKSVEIHKRVGAFAMALQTVNKCLSDAVCALAHNMSD
GESRAVALIQSGNEILETARYSSEASVQDKDLISEQQIVLRQLEAILHIYRLARAGQTVD
ALRETIKLPFLHLDPQSSNISVDVFRNLSPHVQACVPDLLKVALNCMDNVRDTDGTLRAV
KSKIANLVVSNMSWDWPQDLYQKVAQCI
NT seq
2607 nt
NT seq
+upstream
nt +downstream
nt
atggccggcgtcggcgccgatggcggaggagacacggagatgggcggctggtcagagctg
ctcaacatctccaccaagctcctcgagcaggccgcccccacccctcacttccctaccctc
cagaggaacctggaccagctcgaggtgctctccacgaagcttaaggccaagacgatccgc
gccgaggcgccgtcgcagtcgctctccgccaccaggttgctggcgcgcgaggggatcaac
gcggagcagctcaccagggacctcaagtcatttgaactcaagaccacctttgaggatgtt
tttccatcggaagcaacttctgtcgaggaatacctgcaacagcttcatgaaatggcaatt
gtctcatccatccaaggagcacaaaaggacaacttacagagttttaacaattatatgatg
caagttcttgaggatgactggcagaaggagaagagagatttcttgcagagtctaagccga
ctttctacattaccaaagagaaacaccaatctagctggtggtctgtctcgttatgctctg
atgccatcttcagcttccagtcctcaagcttcatcagggctgcctgctgcggaagtcatg
cccatacctaacaagaccataattgatagtaaatcttcagtttacgcgggggttgtgaag
gatctcaacgacgctagaggacgcagtctgcctttcagtcctgctacagctttcagagct
gcctacgagtccttgtctcttgatgctactggctcgaagtcagtgaccatgcagaaagtg
tggcatttgattcaggcattagtaggggaagggtcaactcataaaaatgtttcaagaaaa
atgtcactagtggttggagcaaggcgacaccttgaatggggtcatgagaaatacattatt
gagaccatcaacagccagccagcactagctgctcttggtggatcggttggcaatcttcaa
aagattcgtgcatttcttcgggtccggttgcgggatcatggcgtgttagactttgatgca
agtgatcttcgcagacagccaccagtggatacaacatggcagcagatttatttctgctta
agaactgggtattatgatgaagcaaggcaagttgctcaatcatctcgtgctgcttacaac
ttcgcccctctgcttgcagaatggattactactaatggtgctgtgtcattagagaccgct
ctgacagcttctgaggaatgtgaaaaaatgctcagaatgggtgaccgaccagggcgtcct
ggttatgatagaaagaagttgcttctttatgccataatttgtggctgtcgacggcaaatt
gacagattacttaaagatctgccaacacttttcaatactatagaggatttcttgtggttc
aagttgtcagctctacgggaatactccagtgcatcttcttctaatgttgcgaatgaaggc
ttggttccttatatgctggaggatttacaaaattatctgaacaaatttgagccatcgtat
tatacaaagagtggaaaagaccccttggtctatccctatattctgctcttaagcatccaa
tcacttccagcaattctttatttgtctaaagaagttggagaggaagggtaccatgttgat
gctgtgcatatttcaattactctagctgatcatggtattctccctgagggagttggatca
ggccagaagatgggtgtaatggatgcttgcgcagaagctgccagtattatacggcaatat
ggctctatttacttgcgcaatggcaaccttgatttggccttggagtattatgcacaggct
gctgctgcaatgggtggaggagaggtatcatggattggtcaagggaatgctgatcaacaa
cgtcaacgaagttcaatgttgatgcaactgctcacagagatattactaagggatggtggt
attcaacttctgcttggtccaagtggaatgggagaagaaggagaactaaaaaagtatatg
atggatttgagaagtaggcagcaattcttgcttgaagccgcccatcggtgtcaagaggca
gggctttatgacaaatcagtggaaattcacaaaagagttggagcctttgccatggcactt
cagacagtaaacaagtgtctatcggatgcagtatgtgccctggcacacaatatgtcagat
ggcgaaagccgtgctgttgctctaattcaatctggcaatgaaattttggagacagccaga
tattcttctgaagccagtgttcaagacaaggatctcatttctgaacagcaaattgtactg
agacagcttgaagctattcttcacatttataggctagctcgtgctggacaaactgttgac
gctctgagggaaaccatcaaacttccatttcttcatttggatccacagtcttcgaatata
tcagtcgatgtattcaggaatttatcaccccatgttcaagcttgtgtgccagatctcctg
aaggttgctctaaactgcatggacaatgttagagataccgatgggaccctgcgtgctgtc
aagtcaaagattgcaaaccttgtggtaagcaacatgagctgggattggccacaggatttg
taccagaaggtggctcagtgcatatga
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