Triticum dicoccoides (wild emmer wheat): 119285768
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Entry
119285768 CDS
T07278
Name
(RefSeq) apoptotic chromatin condensation inducer in the nucleus-like
KO
K12875
apoptotic chromatin condensation inducer in the nucleus
Organism
tdc
Triticum dicoccoides (wild emmer wheat)
Pathway
tdc03013
Nucleocytoplasmic transport
tdc03015
mRNA surveillance pathway
tdc03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
tdc00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
119285768
09122 Translation
03013 Nucleocytoplasmic transport
119285768
03015 mRNA surveillance pathway
119285768
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tdc03019
]
119285768
03041 Spliceosome [BR:
tdc03041
]
119285768
Messenger RNA biogenesis [BR:
tdc03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
119285768
Spliceosome [BR:
tdc03041
]
Complex C
Other components
EJC/TREX
119285768
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RSB_motif
SAP
SAP_new25
Motif
Other DBs
NCBI-GeneID:
119285768
NCBI-ProteinID:
XP_037420989
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Position
4A:complement(263802176..263806576)
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AA seq
737 aa
AA seq
DB search
MSSFPVLKNRPIDQWKVTELKDELRKRRLPVKGLKEELVRRLFESIQSEEASDESAEDVG
ANEGAPIGKDAKDVGANGPSDQAPEEHTASQKTAVSATEVGQETRVHATQETAVPLPEVT
QEIMASSVEQSPGDNVVANHESLSKEAPTEKGDQPEAVAGENSTVQAGHQHSESNKMHIE
ETPEVVTNGTTVVADVTSADLKSDLISSEAKSDTAEASKTDKHDTLPKPVDAQIPDADPM
ETDVAAASMNNDGERFVPENDLGDNTWIDNEVCSSNLMNEDHKPIVSKSNNQVPEVCPDL
GSPIKCESISSDDISNTKKNIKDNLNANNFDLELEVKPDMVKPSSGITSLGGELQPLDDD
KELVKNQFSLEDTDSTANVDEVGSPEKLNLDRSSGDESMEDDVMEIKQLDFSVKYDDLRG
KTEPNSEYVKEVSLPDSVVKSSSADTKEVIAEENPSASTEKRKFQAQETVANTEPIKRQR
RWAADSGNVPERQPLSQSGSDARKDILQPALKRSLGRSDSTASGDSPKERIVPPSQKSAT
TSLRIDRFVRPFTLRAVQELLGKTGSVCSFWMDHIKTHCYVTFSSVEEATATRDAVYNLQ
WPPNNGNYLLAEFVDPQEVKLKLEPPPPPPAATAAAVPISPATTPREAPFQQGQANQSVP
CQAAATPREQLPPPPPLVKPPTSDPREKLPPTPKKAEPPVVTLDDLFRKTQSSPRIYYLP
LSDEEVSAKLAAQGKAN
NT seq
2214 nt
NT seq
+upstream
nt +downstream
nt
atgtcatcattccctgtgctgaagaatcgacccatcgatcaatggaaagttactgagttg
aaggatgaacttcgaaagaggaggctccctgtaaaaggtctgaaagaagaacttgtgagg
cgtctctttgaatctattcagagtgaagaggcatctgacgaatctgctgaagacgtcgga
gccaatgaaggcgcacccattggtaaagatgcgaaagatgtgggggcgaatggaccgtct
gatcaagcacctgaagaacatactgctagtcagaaaactgcagtttctgctacagaagtt
ggtcaggaaactagggttcatgcaactcaggaaactgcagttcctctcccagaagttact
caggaaattatggcttcgtctgtggaacagtcccccggggataatgtagtggcaaaccat
gaatccctgtcaaaagaagccccaacagaaaaaggagatcagccagaagcagttgctgga
gaaaattctacagtacaagcagggcaccagcactctgaaagcaataagatgcacattgag
gagacaccagaggttgtcaccaatggaacaactgttgtcgctgatgtgaccagtgctgat
ctcaagtcggacctgatctcttctgaagccaagtcagatactgctgaagctagcaaaact
gataaacatgacacattaccaaaacctgtggatgcccaaataccagatgctgatcctatg
gaaactgatgttgcagctgcatcaatgaacaatgatggggagaggtttgttcctgagaat
gatttgggcgacaatacatggatcgataatgaagtgtgcagttctaacctcatgaatgag
gatcacaagcccattgtatcaaaatcaaataatcaggtacctgaggtttgcccagatcta
gggtctccaattaagtgtgagtcaatttctagtgatgatatatcaaataccaaaaagaat
ataaaggataacttgaatgctaataattttgatttagaactagaggttaagccagatatg
gtcaaaccatcatccggcattacttccttaggtggagaattgcagccattggatgatgac
aaagagttggtcaagaaccagttctctttggaagacacagattccactgccaacgtggat
gaagttggctctccagagaaactaaatttagacaggagttcaggtgatgagtcaatggag
gatgatgttatggagattaagcaacttgatttcagtgttaaatatgatgatctcagagga
aagactgagcctaactcagaatacgtgaaagaggtgtctcttcctgattctgttgtcaag
agctcctctgctgatacaaaggaagttatagctgaagaaaatccatcagcttcaactgaa
aagagaaaatttcaagctcaagaaactgttgcaaacactgagccaatcaaacgtcagcgt
cgatgggctgcagatagtggcaatgttccagaaagacaaccattgagtcaaagtggttct
gatgctcgtaaggatattctccagcctgccttaaaacgttctcttggcaggtctgattca
acagcaagtggagattctccaaaggagaggattgtgccaccatctcagaaatctgcaaca
acttccttgagaatcgaccggtttgtacgcccatttaccctgagagctgtgcaagagctt
cttggtaaaactggatctgtttgtagcttctggatggatcatatcaagacccactgctat
gttacattctcctcggtggaggaagctacagctactcgtgatgctgtctacaacctgcag
tggcccccgaacaatggcaattatctgttagctgaatttgttgatccccaggaagtgaaa
ctcaagcttgaaccccctccccctcccccagcagcaacagcagcggcggttcctattagc
ccagccactacaccaagggaggctccttttcagcaaggtcaggcaaatcaaagtgtgcct
tgccaagctgctgctacaccaagggagcaattgccgcctccaccaccccttgtgaagcct
cctacatctgatccaagggagaagctcccacccaccccaaagaaggcagaacctcctgtg
gtgacacttgatgatctcttcagaaagacacaatcctctccaaggatttactatctgcct
ttatcagatgaggaggtgtcagccaagcttgctgcacagggcaaagcaaattag
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