Triticum dicoccoides (wild emmer wheat): 119285819
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Entry
119285819 CDS
T07278
Name
(RefSeq) oligouridylate-binding protein 1B-like
KO
K13201
nucleolysin TIA-1/TIAR
Organism
tdc
Triticum dicoccoides (wild emmer wheat)
Brite
KEGG Orthology (KO) [BR:
tdc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tdc03019
]
119285819
03041 Spliceosome [BR:
tdc03041
]
119285819
Messenger RNA biogenesis [BR:
tdc03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Stress granule specific factors
119285819
Spliceosome [BR:
tdc03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
119285819
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_occluded
RRM_10
RRM_7
RRM_PARP14_3
RRM_5
RRM_RdRP1_2
RRM_Nup35
RRM_8
Motif
Other DBs
NCBI-GeneID:
119285819
NCBI-ProteinID:
XP_037421046
LinkDB
All DBs
Position
4A:301881304..301886995
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AA seq
448 aa
AA seq
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MQQRMKQAAAVAAQQQQQMMQQALLMHHHQQQAAAAAAAVPPMFPPHHAHPGLLAAPHIE
PIVSGNLPPGFDSSTCRSVYVGNIHLQVTDSLLHEVFQSIGPVEGCKLIRKEKSSFGFVD
YYDRRYAAIAIVSLNGRQLFGQPIKVNWAYASTQREDTSGHFNIFVGDLCPEVTDAALFA
FFSAYSTCSDARVMWDQQTGRSRGFGFVSFRNQQDAQTAMNELNGKWLGNRQIRCNWATK
GANAGEEKQSTDSKGMVELINGSSEAGKENANEDGPENNPQYTTVYVGNLPHDINSNDVH
RFFHLLGAGSIEEVRVTRDKGFGFVRYSTHEEAAQAIQTGNGQLIGGRQIKCSWGSKPTP
PGTASAPLPPPALAPYTPGVSAADLISYDRSLALSKMAADPALMGQHAALRQAAMDMGAG
ARKAIFDGGFQSVNPQQQQQQQQQLMYY
NT seq
1347 nt
NT seq
+upstream
nt +downstream
nt
atgcagcagaggatgaagcaggcggcggcggtagcggcgcagcagcagcagcagatgatg
cagcaggcgctactcatgcaccaccaccagcagcaggcggcggccgcggcggccgcggtg
ccgcccatgttcccgccgcaccacgcgcacccgggtctcctcgccgcgccgcatatagag
cccatcgttagtgggaacctgcctcctgggtttgattcaagcacgtgccgcagtgtgtat
gttggcaatatccatcttcaagtcacagattcactactgcatgaagttttccagagtatt
ggtccagttgaagggtgtaagctcattaggaaagaaaagtcatcttttggttttgttgac
tattatgaccgtagatatgctgcaattgctattgtgtcactcaatggtagacaactgttt
ggccagccaataaaagtcaattgggcatacgcaagtacccagagagaggatacatcaggt
cattttaacatctttgtcggggatctttgcccggaggttacggatgctgctttgtttgct
tttttctcggcatattctacctgttcagatgctagagttatgtgggatcagcagactgga
cgatctagagggtttggtttcgtttcttttaggaatcagcaggatgcacaaactgccatg
aatgagttgaatggaaagtggcttggcaaccgccaaattcgttgcaattgggcgacgaag
ggcgctaatgctggtgaagagaagcaaagtacagactccaagggtatggtggaattgata
aacggctcatcagaggctggcaaggagaatgcaaacgaagatggtcctgaaaataaccca
cagtatacaactgtttatgttggcaatcttccccatgatatcaacagcaatgatgtgcat
cgatttttccatttactcggggctggctcaattgaggaggtccgtgtaacacgcgataaa
ggatttggctttgtgagatatagtacccatgaagaagctgcacaagcaatacagacgggt
aatggccaacttattggcgggaggcagatcaagtgctcttggggaagcaagccaactcca
ccagggacagcatctgcgcctctgcctcctccggcattagcgccatacacccctggcgtg
tcagcagctgacctcatctcctacgaccgatcccttgctctgagcaagatggctgctgac
ccggccctgatgggtcagcacgccgccctgaggcaggccgcgatggatatgggcgccggc
gcccgcaaggccatctttgacgggggcttccagagtgtcaaccctcagcagcagcagcag
caacagcagcagctcatgtactactga
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