KEGG   Triticum dicoccoides (wild emmer wheat): 119286044
Entry
119286044         CDS       T07278                                 
Name
(RefSeq) splicing factor U2af large subunit B-like isoform X1
  KO
K12837  splicing factor U2AF 65 kDa subunit
Organism
tdc  Triticum dicoccoides (wild emmer wheat)
Pathway
tdc03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:tdc00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    119286044
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:tdc03041]
    119286044
Spliceosome [BR:tdc03041]
 Complex A
  U2 snRNP components
   U2 related factors
    119286044
 Complex B
    119286044
SSDB
Motif
Pfam: RRM_1 RRM_7 RRM_occluded DUF4154
Other DBs
NCBI-GeneID: 119286044
NCBI-ProteinID: XP_037421278
LinkDB
Position
4A:434790900..434796518
AA seq 550 aa
MADDNGGGGGDDYVSEAVRPEGDTHTREEGLSKSRDRDREKDKDKERHRDRDRDRGRDRD
RGRDRDLDKDRDRDKDRDRHQRHHRDKREHRDRPDDHDRHRSRDSERRRDRERDGHRRHR
SRSRSRSRGRDDHRSRSHSKSSKRVSGFDLGPTAQSVLPQFPTIPTPSQLPGSSIPGMFP
NMLPFAVGQFNPLVMQPQAMTQQHIFPQATRHARRVYVGGLPPSANEQSVAIYFNQVMAA
IGGNTAGPGDAVLNVYINHDKKFAFVEMRSVEEASNAMALDGILFEGAPVKVRRPTDYNP
SLAAALGPSQPSSNLNLAAVGLTPGSAGGLEGPDRIFVGGLPYYFTEAQVRELLESFGPL
RGFDLVKDRETGNSKGYAFCVYQDLNVTDIACAALNGIKMGDKTLTVRRANQGSAQPRPE
QESILLQAQQQVQLQKLVYQVGALPTKVVCLTQVVTADELKDDEEYEDIMEDMRLEAGKY
GNLVKVVIPRPHPSGEPVSGVGKVFLEYADVDGSTKAKTAMHGRKFGGNPVVAVFYPENK
FADEDYDAAA
NT seq 1653 nt   +upstreamnt  +downstreamnt
atggccgacgacaacggcggcggcggcggcgacgactacgtcagcgaggccgtccgcccc
gagggtgatacacatacgcgtgaagagggattgtcaaaatccagggatcgagacagagaa
aaagacaaggataaggagcgccatagggaccgtgacagagatagaggaagagacagagat
cggggtcgggacagggatctagacaaggatcgggacagggacaaggatcgggatcgccac
caaaggcatcaccgtgacaaaagggagcaccgagaccgtcctgatgatcacgatcgtcac
agaagccgtgattctgaaaggagaagggaccgcgagagagatggacatcgcaggcatcgc
tctcgttcacggtctcgttcaaggggcagggatgatcacagatctcgatctcattcaaaa
agcagcaagcgagtcagtggattcgacctgggaccaacagcacaatccgtacttcctcag
ttccctaccattccaaccccaagtcagttacctggctcttctattcctggaatgttcccg
aacatgctcccttttgctgttggacagttcaatcccctcgtcatgcagccacaagccatg
actcaacagcatatttttcctcaggctactcggcatgctcggcgtgtttatgttggtggc
cttcccccatctgctaatgaacagtctgttgcaatatactttaatcaagtcatggctgct
attggaggaaacactgctggtccaggtgatgctgttcttaatgtgtacataaaccatgac
aagaaattcgcttttgtggagatgaggtctgtggaggaagcaagcaatgcaatggcactg
gatggcattttatttgaaggtgcaccagtgaaggttagaagaccaacagactataaccct
tctctggcagctgccctgggcccaagccagccaagctccaatttgaatcttgctgcggtt
ggcctaacaccaggttcagccggagggttagaaggcccggaccgtatttttgtgggtggt
ctcccctattacttcacagaggctcaagttcgggagctgcttgaatcatttgggcctctt
cgaggatttgatcttgtgaaagatagggaaactggtaactcaaagggctatgcgttctgt
gtctaccaggacctcaatgtcactgacatagcctgcgctgctctaaatggtatcaagatg
ggagacaaaactcttacggtcagacgagcaaaccagggctcagcccaacctagaccagag
caggaaagtatcctgttgcaggcacagcagcaggtgcagttacagaaacttgtgtatcaa
gttggagcgctccctacaaaggttgtatgcctgacccaggtagttactgctgatgaatta
aaggatgatgaagaatatgaggacattatggaggacatgaggttggaagctgggaaatat
ggtaacttggtgaaagttgtcatcccgcgccctcatccgagtggagagccagtttctgga
gttggaaaggtgttcttagagtatgcagatgttgatggttccaccaaagcaaagacggcg
atgcatggaaggaaattcggtggaaacccagttgttgcggtcttctaccccgagaacaag
tttgctgatgaggactatgacgcggcagcataa

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