Triticum dicoccoides (wild emmer wheat): 119286112
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Entry
119286112 CDS
T07278
Name
(RefSeq) THO complex subunit 4A-like
KO
K12881
THO complex subunit 4
Organism
tdc
Triticum dicoccoides (wild emmer wheat)
Pathway
tdc03013
Nucleocytoplasmic transport
tdc03015
mRNA surveillance pathway
tdc03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
tdc00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
119286112
09122 Translation
03013 Nucleocytoplasmic transport
119286112
03015 mRNA surveillance pathway
119286112
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tdc03019
]
119286112
03041 Spliceosome [BR:
tdc03041
]
119286112
Messenger RNA biogenesis [BR:
tdc03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
119286112
TREX complex
119286112
Spliceosome [BR:
tdc03041
]
Complex C
Other components
EJC/TREX
119286112
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
119286112
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
FoP_duplication
RRM_3
Motif
Other DBs
NCBI-GeneID:
119286112
NCBI-ProteinID:
XP_037421356
LinkDB
All DBs
Position
4A:449584162..449586111
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AA seq
260 aa
AA seq
DB search
MADTLDMSLDDIITKNKHHHRRGRHNPASAASGGSAHPRRRFRSRAATRAVAAPYHQLSL
PQQVPPAFGYVAQPMAMVTAPSALDSPTKLYISNLDYNVSNEDIKELFSEMGEIQRYSIN
YDKSGRSKGTAEVVFSARSSAVAALKKYNNVHLDGKPMKIEVIGTNIEAPAPIPAIFALA
PSPGNFSFPSKSGPGMGVSGRGWSRGGGGFSGRSGGGFGGRGRGRTDRERGKGGGRILEL
SAADLDADLDKYHSAAMQIS
NT seq
783 nt
NT seq
+upstream
nt +downstream
nt
atggctgacaccctcgacatgtcgctcgacgacatcatcaccaagaacaagcaccatcac
cgccgtggccgccacaacccagcgtccgccgcctcgggaggatccgcgcacccacgccgc
cgcttccgcagccgcgccgccacccgcgccgtcgccgcgccctaccaccaactcagcctc
ccgcaacaggtgccgccggctttcggatatgttgcccagccgatggccatggtgacggcg
ccgtctgccttggactcgcccaccaagctctacatctccaacctcgactacaacgtctcc
aacgaggatatcaaggaactgttttctgagatgggtgaaatccagcggtactccattaac
tatgacaagagtggaagatcaaagggaactgcagaggttgtattttcggcaagatcatct
gccgtagctgctcttaagaagtataacaacgtgcatcttgatggcaaacctatgaaaatt
gaagtcattgggacaaacattgaggcacctgcacccatacctgctattttcgctttggct
ccatctcctggaaacttcagttttccttccaaaagtggacctggaatgggtgttagcggt
cgaggatggtctcgtggtggaggtggcttcagtggtcgcagcggaggtgggttcggtggt
cgtggccgagggcgtacggaccgtgagcgagggaagggagggggtcgcatcctggaactt
tctgctgcagatctcgacgccgacttggacaagtaccactcggctgcaatgcaaatcagc
taa
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