KEGG   Triticum dicoccoides (wild emmer wheat): 119286112
Entry
119286112         CDS       T07278                                 
Name
(RefSeq) THO complex subunit 4A-like
  KO
K12881  THO complex subunit 4
Organism
tdc  Triticum dicoccoides (wild emmer wheat)
Pathway
tdc03013  Nucleocytoplasmic transport
tdc03015  mRNA surveillance pathway
tdc03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:tdc00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    119286112
  09122 Translation
   03013 Nucleocytoplasmic transport
    119286112
   03015 mRNA surveillance pathway
    119286112
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:tdc03019]
    119286112
   03041 Spliceosome [BR:tdc03041]
    119286112
Messenger RNA biogenesis [BR:tdc03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    EJC complex
     119286112
    TREX complex
     119286112
Spliceosome [BR:tdc03041]
 Complex C
  Other components
   EJC/TREX
    119286112
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   TREX complex
    119286112
SSDB
Motif
Pfam: RRM_1 FoP_duplication RRM_3
Other DBs
NCBI-GeneID: 119286112
NCBI-ProteinID: XP_037421356
LinkDB
Position
4A:449584162..449586111
AA seq 260 aa
MADTLDMSLDDIITKNKHHHRRGRHNPASAASGGSAHPRRRFRSRAATRAVAAPYHQLSL
PQQVPPAFGYVAQPMAMVTAPSALDSPTKLYISNLDYNVSNEDIKELFSEMGEIQRYSIN
YDKSGRSKGTAEVVFSARSSAVAALKKYNNVHLDGKPMKIEVIGTNIEAPAPIPAIFALA
PSPGNFSFPSKSGPGMGVSGRGWSRGGGGFSGRSGGGFGGRGRGRTDRERGKGGGRILEL
SAADLDADLDKYHSAAMQIS
NT seq 783 nt   +upstreamnt  +downstreamnt
atggctgacaccctcgacatgtcgctcgacgacatcatcaccaagaacaagcaccatcac
cgccgtggccgccacaacccagcgtccgccgcctcgggaggatccgcgcacccacgccgc
cgcttccgcagccgcgccgccacccgcgccgtcgccgcgccctaccaccaactcagcctc
ccgcaacaggtgccgccggctttcggatatgttgcccagccgatggccatggtgacggcg
ccgtctgccttggactcgcccaccaagctctacatctccaacctcgactacaacgtctcc
aacgaggatatcaaggaactgttttctgagatgggtgaaatccagcggtactccattaac
tatgacaagagtggaagatcaaagggaactgcagaggttgtattttcggcaagatcatct
gccgtagctgctcttaagaagtataacaacgtgcatcttgatggcaaacctatgaaaatt
gaagtcattgggacaaacattgaggcacctgcacccatacctgctattttcgctttggct
ccatctcctggaaacttcagttttccttccaaaagtggacctggaatgggtgttagcggt
cgaggatggtctcgtggtggaggtggcttcagtggtcgcagcggaggtgggttcggtggt
cgtggccgagggcgtacggaccgtgagcgagggaagggagggggtcgcatcctggaactt
tctgctgcagatctcgacgccgacttggacaagtaccactcggctgcaatgcaaatcagc
taa

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