Triticum dicoccoides (wild emmer wheat): 119286116
Help
Entry
119286116 CDS
T07278
Name
(RefSeq) probable pyridoxal 5'-phosphate synthase subunit PDX1.1
KO
K06215
pyridoxal 5'-phosphate synthase pdxS subunit [EC:
4.3.3.6
]
Organism
tdc
Triticum dicoccoides (wild emmer wheat)
Pathway
tdc00750
Vitamin B6 metabolism
tdc01100
Metabolic pathways
tdc01240
Biosynthesis of cofactors
Module
tdc_M00916
Pyridoxal phosphate biosynthesis, R5P + glyceraldehyde-3P + glutamine => pyridoxal-P
Brite
KEGG Orthology (KO) [BR:
tdc00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00750 Vitamin B6 metabolism
119286116
Enzymes [BR:
tdc01000
]
4. Lyases
4.3 Carbon-nitrogen lyases
4.3.3 Amine-lyases
4.3.3.6 pyridoxal 5'-phosphate synthase (glutamine hydrolysing)
119286116
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SOR_SNZ
ThiG
Dus
TetR_C_27
NanE
OMPdecase
NMO
Motif
Other DBs
NCBI-GeneID:
119286116
NCBI-ProteinID:
XP_037421360
LinkDB
All DBs
Position
4A:complement(450422567..450423925)
Genome browser
AA seq
314 aa
AA seq
DB search
MASDGVVALYGNNKAVVEPSAKPAAATFSVKVGLAQMLRGGVIMDVVTAEQARLAEEAGA
CAVMALERVPADIRAQGGVARMSDPALIRDIKRAVTIPVMAKARIGHFVEAQILEAIGVD
YVDESEVLTLADDAHHINKHNFRVPFVCGCRDLGEALRRIREGAAMIHTKGEAGTGNVVE
AVRHVRSVMGAVRALRNMDEDEVFSYAKQIAAPYDLVMQTKQLGRLPVVQFAAGGVATPA
DAALMMQLGCDGVFVGSGIFKSGDPARRARAIVQAVTHYSDPEILANVSAGLGEAMVGIN
LSDPNVERFAARSQ
NT seq
945 nt
NT seq
+upstream
nt +downstream
nt
atggcttccgacggcgtggtggccctgtacggcaacaacaaggcggtggtggagccctcc
gccaagcctgccgccgccaccttctccgtcaaggtgggcctcgcccagatgctgcgcggc
ggcgtcatcatggacgtggtcaccgccgagcaggcgcgcctcgccgaggaggccggcgcc
tgcgccgtcatggcgctggagcgcgtgcccgccgacatccgcgcccagggcggcgtggcc
cgcatgtccgacccggccctcatccgcgacatcaagcgcgccgtcaccatcccggtgatg
gccaaggcccgcatcgggcacttcgtggaggcccagatcctggaggccatcggcgtggac
tacgtggacgagagcgaggtcctgaccctcgccgacgatgcccaccacatcaacaagcac
aacttccgcgtccccttcgtgtgcggctgccgcgacctgggggaggcgctccgccgcatc
cgcgagggcgccgccatgatccacaccaagggcgaggccggcaccggtaacgtggtggag
gccgtccgccacgtccgctccgtgatgggcgccgtccgcgccctgcgcaacatggacgag
gacgaggtcttcagctacgccaagcagatcgccgccccgtacgacctggtgatgcagacc
aagcagctgggccgcctcccggtggtgcagttcgccgccggcggcgtggccacccccgcg
gacgccgccctgatgatgcagctcgggtgcgacggggtgttcgtcggctccggcatcttc
aagagcggcgacccggcgcgtcgcgcccgcgccatcgtgcaggccgtgacgcactacagc
gacccggagatcctggccaacgtcagcgcggggctcggggaggccatggtggggatcaac
ctgtccgaccccaacgtggagcgcttcgccgcccgatcccagtag
DBGET
integrated database retrieval system
