Triticum dicoccoides (wild emmer wheat): 119286477
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Entry
119286477 CDS
T07278
Name
(RefSeq) DNA topoisomerase 2-binding protein 1-A-like
KO
K10728
topoisomerase (DNA) II binding protein 1
Organism
tdc
Triticum dicoccoides (wild emmer wheat)
Pathway
tdc03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
tdc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
119286477
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
tdc03032
]
119286477
03400 DNA repair and recombination proteins [BR:
tdc03400
]
119286477
DNA replication proteins [BR:
tdc03032
]
Eukaryotic type
DNA Replication Initiation Factors
Other initiation factors
119286477
DNA repair and recombination proteins [BR:
tdc03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-B complex
119286477
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BRCT
PTCB-BRCT
BRCT_2
BRCT_3
RTT107_BRCT_5
TopBP1_BRCT0
NIBRIN_BRCT_II
ECT2_BRCT0
Motif
Other DBs
NCBI-GeneID:
119286477
NCBI-ProteinID:
XP_037421757
LinkDB
All DBs
Position
4A:512804485..512816897
Genome browser
AA seq
978 aa
AA seq
DB search
MTPSHAPGPAAPATSFGGGRRTATFAGASVFLSRKLVAPEVFDAVHDALRLNGADVLLCA
DPTRTGPLDYHVISSSSHERFANLKDKGCNLLGPQCILSCAKEHRSLPKQGYTCCLAMDG
VTILCSGFEKDQRARIEQLVTAMGGLLQTKVSMDVNFVVAKDVSAAKYKWAVNSLKKPIV
NMNWLEQCWIEHRVVPHEPYRILPFTGLNICITKLDADKRKELMEIIEQNGGQYSANLTK
KCTHLVANEPGGDKYLVAKKWGNIHIVDRRWVDQSVARRAYLDESAYVIGQNSFNYNGIK
GSLKEQRNPEMSGASFQSVPAVSVDDSVSMSQYVPVSSGYASTICTTDIVGAPCVQETNE
MPVESHVAEDSEAEDDDLYLSNCRISLVGFEEKELSRLVMMIRNGGGSRHVMLSERLTHI
ILGAPSEEEKKEVRRLAAWGVINVVKAKWLEDCNKIKTEVKVSTAHLASELLSKEFPFVG
MEKSAATRETKAAKSSHGIFHVPTVSDSHDKQLAKDPSSERKPAKGKHENMNNARAATRS
AKSSQQNGLTSTGKATSAANSQRSTSSNIFEGRTFCFSNSFSHDRRPEVIDWVRKGGGTM
VVDDAQATGVDFIIECHGQNSMQCDYSHSTVVSTQWIASCIEVGHLQDVGSHPIFSPLRC
RIPLPGFEDFRFCVSQYDEKDRVLLKNLCLTLGAKFTEKASKRVSHLICKFASGPKYEAY
HNKRIPTITIEWLFECVRQDTIMPYDQFQPKPPTSQDKDAGMCIVSQFPTQAANTTSKFD
CPEPLSEPQVPRSSSKHSSGSSISEEKIASSVSKRRRSETAKANDTSTNIGRTEKHSDSS
SALGVADSIKDFEDLLVQSSRDPALDAYVVGQDEEPQPVPDNAFTSLYNDMKTRSNNWPQ
KQHMPPGKNVKSPDSTRAPVPTPYLPFSETQTDSQIIGYEEDLTGMQKIIDRVSSQKKTI
DSSGTDSSVMGHQWDSLK
NT seq
2937 nt
NT seq
+upstream
nt +downstream
nt
atgacgccgtcgcacgcccccggccccgccgcgccggccacctccttcggcggcgggcgg
aggaccgccacgttcgcgggcgccagcgtgttcctctcgcggaagctggtggcccccgag
gtgttcgacgccgtgcacgacgcgctccgcctcaacggcgccgatgtcctcctctgcgcc
gaccccacccgcacggggcctctcgactaccacgtcatctcctcctcctcccacgagagg
ttcgcgaatctgaaggacaaaggctgcaatctgctaggaccacaatgcatcctttcctgt
gctaaggagcatcgttccctacctaaacaaggttatacttgttgtcttgcaatggatggg
gttactatactctgttcaggcttcgagaaagatcagagggccaggattgaacaattagtg
acagctatgggaggtcttttgcagactaaagtgtccatggatgttaacttcgtagttgca
aaggatgtctcggctgcaaaatataaatgggccgtgaatagcctgaagaagcctattgtc
aatatgaactggttggagcaatgctggatcgaacatcgtgttgtgcctcatgaaccttac
aggattcttccttttactgggttgaatatatgcatcacaaaactagatgcagataaacgg
aaggagttgatggaaataatagagcagaatggtggccagtattcagcaaatcttacaaaa
aagtgcactcatttagttgcaaatgaacctggcggtgacaagtatcttgtagctaaaaaa
tggggtaatattcacattgtggatcggagatgggttgaccaatctgttgctcgaagagct
tatctagatgaaagtgcctatgtcattggccagaattcttttaattataatggcataaag
ggttcccttaaagagcaacggaacccagagatgagtggtgcaagttttcaatctgttcca
gcagtatcagttgatgattcagtatcaatgtcacagtatgtgccagtttcttctggttat
gcttcaacgatctgtaccactgatattgtcggtgcaccttgtgtacaagagacaaacgag
atgccggttgagagtcatgtagctgaggattcagaggctgaagatgacgatctgtactta
tcaaattgcagaatttctcttgtgggttttgaggagaaagaattgtcaaggttagtcatg
atgatacgtaatggtggtggatcccggcatgttatgttgagtgagaggcttactcatatt
attctaggtgcaccttcagaggaagaaaaaaaagaggtaagacgccttgctgcttggggt
gtgataaatgtggtaaaggcaaaatggttagaagactgcaataaaataaaaacggaagtc
aaagtatccacagctcatttggccagcgagttactctcgaaagaatttccgtttgtgggt
atggaaaaatctgctgctacacgtgaaacaaaggcagccaaaagttcacatggaatattc
catgttccaactgtcagcgattcacatgataagcagctcgcaaaagatccgtcatctgaa
agaaaaccagccaagggcaaacatgaaaacatgaataatgcccgagcagcaactaggtct
gcaaaatcaagccaacaaaatggattgaccagtactggcaaagcaacttctgcagcaaat
tcacagcgtagcacttcctcaaatattttcgaagggagaacattttgtttctcaaattca
ttttctcatgaccggagaccggaggttatcgattgggtcagaaaagggggaggcactatg
gtcgtggatgatgcacaagcaactggtgtggatttcataattgagtgccatggacagaac
agcatgcaatgtgactattctcattcgaccgttgtttcaactcaatggatagcctcatgt
attgaggtgggccacttgcaagatgttggaagtcatcctatcttctctcctttgcggtgt
cgcatcccattgccagggtttgaagacttccgtttctgtgtttcacagtatgatgagaaa
gatagagttctgcttaagaacctctgtcttactctaggagctaaattcacagagaaagca
tcaaaaagagtgagccatcttatctgtaaatttgcgagcggtccaaagtacgaggcatac
cataataagagaattccaacaattaccatagagtggctcttcgaatgtgtgagacaggac
accattatgccttacgaccagtttcagccgaaaccacctacttctcaggacaaggatgcc
ggtatgtgcattgttagtcaatttccgacacaagccgccaatacgacctctaaatttgat
tgccctgagccacttagtgaacctcaagtaccaagaagcagttcaaaacacagctcaggc
tcctctattagtgaggagaaaattgcttcttctgttagcaaaagaagacgatccgaaaca
gccaaggctaatgatacatctacaaatattggacgaacggagaaacattcggacagcagc
tctgctctgggtgttgcagactccataaaggactttgaggacctactggttcagtcatcc
agggatcctgcacttgatgcttatgttgtaggtcaagacgaggaacctcaacctgtgcca
gataatgctttcacttccctatacaatgacatgaaaacccgctcaaataactggccacag
aagcaacacatgccccctggcaagaatgtcaagagcccagactccacccgggcccctgtc
ccaactccctatctacctttcagcgaaacgcagacagattctcagatcatcgggtacgaa
gaagatttgactggcatgcagaagatcattgacagagttagttctcaaaaaaagaccatc
gacagttcaggcaccgacagttcagtcatggggcatcaatgggactccctcaaatga
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