Triticum dicoccoides (wild emmer wheat): 119286751
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Entry
119286751 CDS
T07278
Name
(RefSeq) WD repeat-containing protein PCN-like
KO
K14548
U3 small nucleolar RNA-associated protein 4
Organism
tdc
Triticum dicoccoides (wild emmer wheat)
Pathway
tdc03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
tdc00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
119286751
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
tdc03009
]
119286751
Ribosome biogenesis [BR:
tdc03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
119286751
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_WDR3_1st
Beta-prop_THOC3
Beta-prop_WDR5
WD40_CDC20-Fz
WD40_Prp19
WD40_WDHD1_1st
Beta-prop_EML_2
WD40
Beta-prop_WDR36-Utp21_1st
WDR55
Beta-prop_WDR90_POC16_2nd
Beta-prop_WDR36-Utp21_2nd
Beta-prop_WDR3_2nd
Beta-prop_RIG_2nd
ANAPC4_WD40
Beta-prop_EML
Beta-prop_TEP1_2nd
Beta-prop_HPS5
WD40_Gbeta
Beta-prop_CAF1B_HIR1
Beta-prop_IFT140_1st
Beta-prop_Aladin
WD40_MABP1-WDR62_2nd
EIF3I
Beta-prop_ACSF4
Beta-prop_SCAP
Beta-prop_IFT122_1st
NBCH_WD40
Tricorn_2nd
Motif
Other DBs
NCBI-GeneID:
119286751
NCBI-ProteinID:
XP_037422093
LinkDB
All DBs
Position
4A:complement(558767034..558772223)
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AA seq
807 aa
AA seq
DB search
MEKLRIHHCGGRAVAWAPSPIVALATSPCASQVAAAREDGSLELWLVSPGSVGWHNQLTI
QGGAESRVTSLVWVPNGAGGRLLSSSVDGSVAEWDLFHLQQKTVLDTVGVPVWQMAMEPT
DDQLISGNKSSGCAVNGHANHNGSTDSELSYVDDGQSSDDEDDSAKTSSSYRVNEFPRLA
LACDDGSVRLYNVPESGPLTYYRSLPRVSGRVLSVTWSNNAKFIFSGSSDGLIRCWDSTI
FHEKYRITAGLGGAGSGSEFCIWSLLFLRCGTLVSGDSSGSVQFWDNRHGTLLQAHTYHK
GDVNALATVPSQNRVFSAGSDGQVILYKASKNEFSAHNEKVAEEQMHKWVYVGYVRAHSH
DVRALTMAVPICKEDAVPEEKVVKVRRKDEFSYRKWAHLGVPMLISGGDDTKLFAYSARE
FTLYAPHNFCPAPQRPLINLARDCTVNGDSVMLVQSVNCLDVLLVSVKNKLTPSTSSGGD
ATIRQVVHLKSKGSRKIIASAVSTNGMLFAYSDCVKPCLFALRHKGGKKFSLDKIELPKG
IPCSQSMMFTDDSSSLVLSCNDGKIYVVDIASRKISNIFRPTRKIDGTKTSSKEPPVTKM
FVSADGQWVAAANCFGDVYIFNLEVQRQHWFIPRMNGGSVTSGGFCPKNNALVITTSKNE
VYVFDVEAKELGEWSKRHTHELPTRFQDFPGEVIGLSFHKMSPFSVMIYSARAMCVIDFG
LPVVQDVQLSTSEKTDSQKAAKTKVKRKHRDEDLKQEKRSNFTFFAFKDPVLFAGHLLDS
SILVVEKQWMDVVQGFGPPVHRHIYGT
NT seq
2424 nt
NT seq
+upstream
nt +downstream
nt
atggagaagctccgcatccaccactgcggcggccgcgcggtcgcctgggccccctccccc
atcgtcgccctcgccacctccccctgcgcctcccaggtcgccgccgcgcgggaggacggc
tccctcgagctctggctcgtctcccccggctcggtcgggtggcacaaccagctcactata
cagggaggcgcggagtcgagggtcacatcgcttgtgtgggtgccaaatggcgcagggggc
cgtctgctctcttccagcgttgatgggtcggtggctgaatgggatctcttccacctgcag
caaaagactgtcctagatactgttggggtaccagtctggcagatggccatggagcctacg
gatgatcaattgatttctggaaataaaagctcaggatgtgctgtgaatggccatgcaaat
cataatggatccaccgactctgaattaagttatgttgatgatggtcagagctccgatgat
gaagatgattctgccaagacaagctcttcgtatcgtgtgaatgaatttccgcgtttggct
ctggcatgtgacgatggttctgtacgcttgtataatgtgcctgaatctggcccgctgacc
tactatagatctcttccaagagtgagcggacgagttttgagtgtaacatggagtaataat
gccaaattcatattttcgggaagcagcgatggattaatcagatgctgggattcaacaatt
ttccatgaaaagtatcgcatcactgctggattagggggtgctggtagtggaagtgaattt
tgtatatggtcattactatttctaaggtgcggaacccttgttagcggagatagttctggg
agcgttcaattttgggataaccgccatggaactcttctgcaagcccacacttaccataaa
ggcgatgttaatgcactagcaactgtgcctagtcagaaccgggtattttctgcaggatct
gatgggcaggtaattttgtacaaggcatcaaaaaatgagttcagtgctcataatgagaag
gtggctgaagagcagatgcacaagtgggtctatgtgggatatgttagggcccactctcat
gatgtaagggcattgactatggccgtaccaatatgcaaagaagatgctgtaccagaggaa
aaggtggtaaaggttcgccgcaaggatgaattcagttaccgcaagtgggcacatctgggt
gtaccgatgctcatttctggtggggatgacaccaagctgtttgcttattctgcacgggag
tttactctatacgcacctcataacttctgccctgcacctcaacgtccattgataaattta
gcaagagattgcacagttaacggagattctgtgatgcttgtccagtctgtcaactgcttg
gacgttctacttgtatcagttaagaacaaactgactccaagtacatcatccggaggagat
gctacgatacgacaagttgttcatcttaaaagcaaggggtctagaaaaataatagcaagt
gctgtctctaccaatggaatgctatttgcctattcggattgtgtaaagccctgccttttc
gcactaagacacaagggcggaaaaaagttctcgctagacaaaatagagttgccaaaggga
ataccatgctctcagagcatgatgttcactgatgattcatccagtctggttctatcttgc
aatgatgggaaaatttatgttgtggatattgcgtcaagaaaaatttcaaatatatttcgc
cctacaagaaagatagatggaacaaaaacttcttccaaagaaccacctgtcacaaaaatg
tttgtgagtgctgatgggcagtgggtggctgcagctaactgctttggggatgtctacata
tttaaccttgaggtccagaggcaacactggttcataccgagaatgaatggtggctcggtt
acatctggtggcttttgtcccaagaacaatgcccttgttataactacatctaaaaatgag
gtttatgtatttgatgtggaagcaaaagaactgggcgaatggtctaagcgtcatacacat
gaattacccacaagattccaagacttccctggagaggtcattggcctctcatttcataaa
atgagcccattttcagtcatgatatacagtgccagggcaatgtgcgttattgattttgga
ttgccagttgttcaggatgtccaattgtcaacatcagaaaagacagactcacaaaaggct
gcgaaaacaaaggttaagcggaaacatcgtgacgaagatttgaaacaagagaaaaggagt
aacttcaccttctttgcatttaaagatccggtgctgtttgctggccacctactggacagt
tcaattctggtagtagagaagcaatggatggatgtcgtccaaggattcggcccaccggtc
cacagacacatatacgggacatga
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