Triticum dicoccoides (wild emmer wheat): 119286897
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Entry
119286897 CDS
T07278
Name
(RefSeq) coatomer subunit alpha-3
KO
K05236
coatomer subunit alpha
Organism
tdc
Triticum dicoccoides (wild emmer wheat)
Brite
KEGG Orthology (KO) [BR:
tdc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tdc04131
]
119286897
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
tdc04147
]
119286897
Membrane trafficking [BR:
tdc04131
]
Endoplasmic reticulum (ER) - Golgi transport
Retrieval pathways
Coat protein complex I (COP-I)
119286897
Exosome [BR:
tdc04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
119286897
Exosomal proteins of bladder cancer cells
119286897
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
COPI_C
B-prop_COPA_B_2nd
WD40
WD40_Prp19
WD40_WDHD1_1st
WDR55
WD40_CDC20-Fz
Beta-prop_EML_2
Beta-prop_WDR90_POC16_2nd
EIF3I
Beta-prop_CAF1B_HIR1
Beta-prop_TEP1_2nd
TPR_COPA_B
Beta-prop_TEP1_C
Beta-prop_WDR75_1st
Beta-prop_EML
WD40_MABP1-WDR62_2nd
WD40_MABP1-WDR62_1st
Beta-prop_EIPR1
ANAPC4_WD40
Beta-prop_SCAP
Beta-prop_SPT8
Beta-prop_DCAF4
Beta-prop_IFT122_1st
WD40_RFWD3
NBCH_WD40
Beta-prop_IFT140_1st
Beta-prop_WDR19_1st
Beta-prop_RIG_2nd
Fis1_TPR_C
ENTH
Zn_ribbon_19
Zn_ribbon_3
zf-CHCC
Zn_ribbon_PaaD
Motif
Other DBs
NCBI-GeneID:
119286897
NCBI-ProteinID:
XP_037422263
LinkDB
All DBs
Position
4A:579062953..579068095
Genome browser
AA seq
1217 aa
AA seq
DB search
MLTKFETKSNRVKGLSFHPRRPWILASLHSGVIQMWDYRTGTLLDRFDEHDGPVRGVHFH
ATQPLFVSGGDDYKIKVWNYKTHRCLFTLTGHLDYIRTVQFHHEYPWIVSASDDQTIRIW
NWQSRTCVAVLTGHNHYVMCVSFHPKEDLVVSASLDQTVRVWDIGALRKKTVSPADDILR
LTQMNTDLFGGVDAVVKYVLEGHDRGVNWASFHPTLPLIVSGADDRQVKLWRMNDTKAWE
VDTLRGHMNNVSCVMFHAKQDIIVSNSEDKSIRIWDATKRTGIQTFRREHDRFWILAAHP
EMNLLAAGHDSGMIVFKLERERPAFSVSADTVFYVKDRFLRFFEYSTQKEVQVAPIRRPG
SVSLNQAPRTLSYSPTENAVLICSDVDGGSYDLYIVPKDSAGRADYLQEAKKGAGGSAVF
VARNRFAVLEKSSNQVLVKNLKNEIVKKSPLPIATDAIYYAGTGNLLCKAEDRVTIFDLQ
QRLVLGELQSAGVKYVVWSSDMEYVALLSKHAVVIASKKLVHRSTLHETIRVKSGAWDEN
SVFIYSTLNHIKYCLPNGDSGIIKTLDVPVYITKVIGNNIFCLDRDGKNKLISVDASEYI
FKLALLRKRYDHVMSMIKSSQLCGQAVISYLQQKGFPEVALHFVKDEKTRFNLALESGNI
QIAVASAKEIDDKDHWYRLGIEALRQGNVGIVEYAYQRTKNFERLTFLYLITGYMDKVGF
MCKIAGQNNNLMGQFHNALYLGDARKRAEILENAGQLPLAYVTAATHGLTEIAERLAAEL
GENVPSLPEGKTRSLLIPPAPLISSVDWPLLRVMRGIFEGGLDATGRAEVEEDDEAAGAD
WGDEDLDIVDASDAVANGGDGFDPEEGEANEEDGEEGGWDLEDLELPEAETPKAAGNARS
TVFVAPTPGMPVSQIWTQKSSLAGEHAAAGNFDTAMRLLSRQLGIKNFAPLKPMFLDLHM
GSHSYLRALATAPVISIAVEKGWSESSSPNVRGPPSLVFTFSQMEDRLKAAYKATTEGKF
PEALRQFVSILHTIPLIVVDSRREVDEVKELIEIVREYVLGLRMELKRKELKDNVNRQQE
LAAYFTNCKLQRVHMRLVLSNAMALCYKQKNFATAEHFARLLLENSPNEVQAKKARQVQQ
QCNGKQDSHELNYDYRNPFVVCGSTYVPIYRGQKDVSCPYCGSRFVPSIEGQLCTICELS
VVGADASGLLCSPTQTR
NT seq
3654 nt
NT seq
+upstream
nt +downstream
nt
atgctgaccaagttcgagaccaagagcaaccgggtcaagggcctgagcttccacccgcgg
cggccatggatcctcgccagcctccacagcggcgtgatccagatgtgggactaccgcacg
ggcaccctcctcgaccgcttcgacgagcacgacggccccgtccgcggcgtccacttccac
gccacccagcccctcttcgtctccggaggtgacgattacaagatcaaggtgtggaattac
aagacacaccgctgcttgtttacgcttactgggcatctcgactacattcgtactgtgcaa
ttccaccatgagtacccatggatagtaagtgccagtgatgaccagacaatccggatctgg
aactggcagtcacgtacttgtgtggctgtgctcaccgggcataatcactatgtcatgtgc
gtgtccttccaccccaaggaggacctggttgtgtcagcatcgctagatcagactgtccgt
gtttgggatattggtgccctgaggaagaagacggtgtcacctgcggatgacatcctgcgt
ctcactcagatgaacactgatctgtttgggggtgtcgatgcggttgtgaaatatgtcttg
gaaggccatgaccgtggtgtcaactgggcatcatttcaccccacattgccactcattgtt
tctggggcagatgaccggcaagtgaagctgtggagaatgaatgataccaaggcttgggaa
gttgatactttgagggggcacatgaataatgtgtcgtgtgtgatgttccatgcgaagcaa
gacatcattgtgtccaactcagaggacaaaagcattcgcatttgggatgccacaaagcga
actggtattcagacatttaggcgggaacatgaccgtttctggatccttgccgcccaccct
gaaatgaatcttcttgctgctggtcatgacagtggcatgattgtgtttaaattagagagg
gaacgcccagctttcagcgtgagtgctgatactgtgttctatgtgaaggacagattcctc
cggttctttgagtactccacccagaaggaagttcaggtggctccaataagaagaccagga
tccgtcagcttgaaccaggcacccaggacactatcttatagtccaactgaaaatgctgtg
ttgatctgctctgatgtggacgggggctcatatgatctgtacattgttcctaaagattct
gctggcagggctgattatttgcaagaggcaaagaagggagctggtggctcggctgttttt
gtggcacggaataggtttgctgtccttgagaagagtagcaatcaagttttggtgaagaat
cttaagaatgaaattgtgaagaagagtcctcttcctattgcgactgatgcaatttattat
gctgggactggtaatttgttgtgcaaagctgaagatcgtgtgaccatctttgatctacaa
caaaggctagttcttggtgaactccagtcagctggtgttaaatatgtagtttggtccagt
gacatggagtatgttgcactgctgagcaagcatgcagtggttatagctagcaagaagctt
gttcatcgctctacactgcatgaaaccattcgtgtgaaaagtggtgcctgggatgagaac
agtgtttttatttactctactttgaaccatatcaaatactgtcttcccaatggagatagt
gggatcataaagacccttgatgtccctgtttacataacaaaggttattgggaacaacatt
ttctgtcttgatcgtgatggaaagaacaagctgatatcagtcgatgcttctgaatacatt
ttcaagctcgcccttctccggaaacgttatgaccatgttatgagtatgattaagagctca
cagctgtgtgggcaggcagtgatttcatatttacaacagaaagggtttccagaagttgct
ctccactttgtgaaagatgagaagacaagatttaatctagctcttgaaagtggtaacatc
caaatcgcagtggcttctgcaaaagagattgatgacaaggatcactggtacaggttggga
attgaggccctgaggcaggggaatgttggtattgtggaatatgcataccagcggacgaag
aattttgagaggctgacttttctgtatcttattactggttacatggacaaggtgggcttc
atgtgcaaaattgccggacagaataacaatttgatgggtcagttccacaatgcattgtat
cttggggatgctaggaagcgagctgagatcctggagaatgccggacagcttcctcttgcc
tatgtcactgccgccactcatgggctcactgaaattgctgaaaggcttgctgctgagttg
ggtgagaatgttccttctctacctgaaggaaaaactcgctcacttttgattccgcccgca
cctctcatatccagcgttgattggccattgctccgggtgatgcgtggcatatttgagggt
ggactggatgctactgggagagcagaagttgaggaagatgatgaagctgctggtgctgac
tggggtgatgaggacttggatattgtggatgcaagtgatgcagtggcaaatgggggtgat
ggttttgatcccgaggaaggtgaagcgaacgaggaggatggtgaggaaggtggttgggat
cttgaagatctggaattgcctgaagcagagaccccaaaagctgctggaaatgctcgctcc
actgtgtttgttgctcctacaccaggaatgcctgtcagccaaatttggactcagaaatct
tctcttgctggggagcatgcagcagcaggcaactttgacactgcaatgaggttgctcagc
cgccagttgggcatcaagaactttgctcccctgaaacccatgtttctcgatctgcatatg
ggcagtcattcatatcttcgtgcacttgcaactgctcccgttatatcaattgctgttgag
aaaggttggagtgagtcctcaagtcctaacgtgaggggccctccttcactagtcttcacc
ttctcacaaatggaagacaggctcaaggcagcctacaaagccacaaccgaggggaagttc
ccagaagcgctgagacagttcgtcagcatcttgcataccattcccctgatcgtggtagac
tcacggagagaagttgatgaagtgaaggagttgatcgagatagtgagggaatatgttctt
ggtctaagaatggaactcaagaggaaggaattgaaggacaacgtcaaccggcaacaggaa
ctggcggcctacttcaccaactgcaagctccagagggttcacatgaggcttgtgctctca
aacgccatggctctatgctacaagcagaagaacttcgcgaccgcagagcactttgcaagg
ctgctcctcgagaacagccccaacgaggtccaagcgaagaaggctcggcaggtgcagcag
cagtgcaacggcaagcaggacagccatgagctcaactatgactacagaaatccgttcgtc
gtctgtggctcgacgtatgttcccatctaccgcggccaaaaggatgtctcgtgcccatac
tgcggatcccggtttgttccttccattgaagggcagctttgtaccatatgcgagctttct
gtggttggcgcggacgcctcgggcctcctgtgctcccctacacagacgagatga
DBGET
integrated database retrieval system
