Triticum dicoccoides (wild emmer wheat): 119287085
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Entry
119287085 CDS
T07278
Name
(RefSeq) phosphomethylpyrimidine synthase, chloroplastic-like
KO
K03147
phosphomethylpyrimidine synthase [EC:
4.1.99.17
]
Organism
tdc
Triticum dicoccoides (wild emmer wheat)
Pathway
tdc00730
Thiamine metabolism
tdc01100
Metabolic pathways
tdc01240
Biosynthesis of cofactors
Module
tdc_M00897
Thiamine biosynthesis, plants, AIR (+ NAD+) => TMP/thiamine/TPP
Brite
KEGG Orthology (KO) [BR:
tdc00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00730 Thiamine metabolism
119287085
Enzymes [BR:
tdc01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.17 phosphomethylpyrimidine synthase
119287085
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Motif
Pfam:
ThiC_Rad_SAM
ThiC-associated
Motif
Other DBs
NCBI-GeneID:
119287085
NCBI-ProteinID:
XP_037422484
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Position
4A:complement(592288330..592294808)
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AA seq
643 aa
AA seq
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MAALQPSFSSLMSMNNSCNTMKFPKTALLPGFGGISRPQDVQDRSASLTCSRPKAVSVTD
QSVAEPAKPRQTKHTVDPAAPEFLPLPAFEDCFPRSTKECSEVVHEETGHALKVPFRRVH
LTGDSGHFDTYDTSGPQNISPRLGLPKIRKEWIDRREKLGSPRYTQMYYAKQGVITEEML
YCAKRENLAPEFVRSEVARGRAIIPSNKRHLELEPMIVGRNFLVKVNANIGNSAVVSSIE
EEVHKLQWATMWGADTVMDLSTGRHIHETREWIIRNSSVPIGTVPIYQALEKVNGIAEDL
SWEVFRDTLIEQAEQGVDYFTIHAGVLLRYIPLTAKRMTGIVSRGGSIHAKWCLTYHKEN
FAYEHWDDILDICNQYDVALSIGDGLRPGSIYDANDSAQFAELLTQGELTRRAWEKDVQV
MNEGPGHIPMHKIPENMEKQLEWCNEAPFYTLGPLTTDIAPGYDHITSAIGAANIGALGT
ALLCYVTPKEHLGLPNRDDVKTGVISYKIAAHAADLAKRHPYAQAWDDALSKARFEFRWL
DQFALSLDPVTAMSFHDETLPSDGAKVAHFCSMCGPKFCSMKITEDIRKYADEHGYGTVE
EAVRQGMSEMSAEFLAARKTISGEQHGEAGGEIYVPESYVVQK
NT seq
1932 nt
NT seq
+upstream
nt +downstream
nt
atggccgcgctgcaaccgtcgttctcgtcactaatgtctatgaacaatagctgcaacacc
atgaagttccccaagactgcacttttgcctggtttcggtggcatttcgcgtcctcaagat
gtgcaggacaggagtgctagcctcacctgttcaaggcctaaggcagtttcagtgactgac
cagtcagtagcagagccagcaaaacccaggcaaaccaaacacacagttgatcctgctgct
ccagaatttctgccgctcccggcatttgaagattgcttcccacggagcaccaaagaatgc
agtgaagtcgttcatgaggaaacaggccatgccctgaaggttccattccggagagtccat
ttgaccggagatagcgggcatttcgacacatatgacaccagtggcccacaaaacataagc
ccaaggcttggactcccaaagataagaaaggaatggattgacaggagggagaagttgggt
agtcctcgatacacccaaatgtactatgctaagcagggagtcataacagaggagatgttg
tactgcgccaaacgtgagaaccttgctcctgaatttgtccggtcagaagtcgcccgtggg
cgagccattatcccttccaacaagaggcacctggaattggaacccatgattgttggaaga
aacttccttgtaaaggtgaatgcaaacattgggaactcagctgttgtgagctccattgag
gaggaagtccacaagctccagtgggccacaatgtggggagcagatactgtcatggacctt
tcaacagggcgccatatccatgagacccgggaatggattattcgtaactcctccgttcct
attggaactgttccgatttaccaagcacttgagaaagttaatggtattgctgaagatctg
agctgggaagtcttcagggacactttaattgaacaagccgagcagggtgttgactatttc
accatccatgctggtgtgctgcttcgttatattcctctcacagcaaagaggatgaccggc
atagtttcacgtggcggatcaatccatgcaaaatggtgcttgacgtatcacaaggagaac
tttgcttatgagcactgggatgacattcttgacatttgtaaccagtatgatgtggcatta
tctattggtgatggcctgaggccgggttccatttatgatgctaatgatagcgctcagttt
gcagagctgctgactcaaggggaactaactcgccgagcatgggagaaggatgtgcaggtg
atgaatgaaggtcctgggcatattccgatgcataaaattcctgaaaatatggagaaacag
ctcgagtggtgcaacgaagcacctttctatacgctgggtccattgacaactgatattgca
cctggttatgatcacatcacctcagccattggtgctgccaacattggggctcttggcacc
gcacttctttgttatgtaacaccaaaggagcaccttgggttgcctaacagggatgatgtt
aagacaggtgtgatatcctacaaaatcgctgctcatgctgctgatttggcaaagcgtcac
ccctatgcacaagcatgggatgatgcactaagcaaggcaaggtttgagtttagatggttg
gaccaatttgctttatccctggatccagttactgcaatgtctttccatgatgaaacatta
ccatctgatggtgctaaagtagcacatttctgctctatgtgtggtcccaagttttgttcg
atgaaaatcacggaggatattaggaaatatgccgatgaacatggttacgggacagtagag
gaagctgtgaggcaaggaatgagtgagatgagtgctgaatttttggcagcaagaaaaaca
attagtggcgaacaacatggtgaagctggaggggaaatctatgtgccagaaagctacgta
gttcagaaataa
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