Triticum dicoccoides (wild emmer wheat): 119287549
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Entry
119287549 CDS
T07278
Name
(RefSeq) DNA-directed RNA polymerase I subunit 1-like
KO
K02999
DNA-directed RNA polymerase I subunit RPA1 [EC:
2.7.7.6
]
Organism
tdc
Triticum dicoccoides (wild emmer wheat)
Pathway
tdc03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
tdc00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
119287549
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tdc03021
]
119287549
Enzymes [BR:
tdc01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
119287549
Transcription machinery [BR:
tdc03021
]
Eukaryotic type
RNA polymerase I system
RNA polymerase I
Core subunits
119287549
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_1
RNA_pol_Rpb1_4
Motif
Other DBs
NCBI-GeneID:
119287549
NCBI-ProteinID:
XP_037423005
LinkDB
All DBs
Position
4A:631300422..631313400
Genome browser
AA seq
1655 aa
AA seq
DB search
MEQEQATSVEVDSILFGFYTDDEVRRLSVKRLTRSERLDAKMCPVPGGLLDPAMGPVNAN
DTCKTCAQQPGNCPGHFGHIELSKPLFNPLLFDTLRDLLRSTCFTCRKFRLSAQLVDRYA
RELELLARGDVVQAKNLQDSAVSEESVEMDEDGSVDKPAPPSDRGNKIWTSIQLKEAHSI
FSKLMKKRVNKCANCGMKNPPIKCQIYGWLTIQGTDGSAVRRKAITDYNLEGDGHISNPN
GTGVSGLMDDRVKASSNQTKDLSDDRPLLATEVESILKDLWEKEARFCMLLCDFQQNLCV
SEKRRGYEMFFLKSMLVPPNRFRPSTNSSLGIMEHPQNVMLSKVQEANLALQHDNPNHMD
ILTRWRDLQTSVNLFYDSSKGLVKSDKDGHGVRQLVDKKTGIVRQKIMGKRVNHSCRTVI
SPDPFLAVNEIGIPPAAASKLTYPEKVTPWNAKNLRGAIRNGAEIHPGATHYKVNNNLYK
LQADHSKRHPTAKTLLASRGSISQPGKDPRCEFESKVVYRHIQDGDIVLVNRQPTLHKPS
MMAHVVRVLPGEKTIRMHYANCSTYNADFDGDEMNVHFPQDEISRAEAINIVDANKQYIG
PRSGEAVRGLIQDHIVGAVLLTKVDTFLSREEYSQLVYGSCVSSTRGPCQSGKRVSIVND
DDTLELLPPAFVKPERWTGKQVITTILNHLTKGHPPFTVEMKGKISVQYLTAKVRHVAEG
EKLRDPEELVLYIRHNELLKGMIDKNQFGNHGIIHTVHELYGADTAGRLLSIFSRLFTLF
LQFHGFTCGIDDLLLSQESNNERTDFLSKSEEHSEEAHKKFLCKKDVDTDLVELQMNIEK
VVRRIGESANVALDKAMLSELNGLTTKVNKNMFPYGLQKPFPKNCLTLMTATGAKGGDVN
MTQISSLLGSQDLEGARVPRMISGKSLPCFPPWDSSSRAGGYVSDRFLTGLRPQEYYFHC
MAGRNGLIDTAVKTSRSGYLQRCLIKSLESLFVSYDHSVRNVDGSIIQFCYGEDGVDVHK
SSFLKKFKELADNRKAVSDRLARYKGELDIYNGDPLSFKSKYITKLPQVLTKSATKFHKE
NKCCCRKLKKKCRCRYNIKEEELMKLLKVKYVASLVDPGEAVGVILAQSLGEPSTQMTLN
TFHLAGRGDMNVTLGMPRIQEILMKASANIGTPYMKCPVHEGKKRKDAARLAEKLRGVTL
ADVVEGIEVCTVPFHNSNGHISSLYKLHLKLFSPDCYPPESELTVDECQASLRTVFVDAM
EYAIEKHLNLLHKVSGIQETRVKDTENLPSEGPEESEGRPTDGDESDASDGDDENEDDLG
ADAEKRKRQENDEMEYEDDIESEDGMNSDPDEETKHELDNEDDPAESGVESEENDEGHLS
DSSNKTAKLEGGLAATKLKKKRNETVENLKEQKQAHITQKRSKKLKLTVHVESADLNFEV
HYILHKEPHILLSQIAQKTLRSLFVSGSHNKNIGLCNVIWPEKKKKGETETKQKETEREE
AYRGLQTAGLDFEVFWDLQDFLNVCKLTSNDIHAMLRTYGVEAARATIINEVKAVFEPFG
IKVDPRHLSLAADYMTSGGSYRPMNSLGMARFCTSPFGKMSFEQATRFITEAAYHGEVDN
LTGPSATVSLGKPAKTGTGAFGLMQNITLEERAVM
NT seq
4968 nt
NT seq
+upstream
nt +downstream
nt
atggagcaggagcaggcgacgtcggtggaggtggattccatcctcttcggcttctacacc
gacgacgaggtccggcggctcagcgtcaagcggctcaccaggtccgagcgcctcgacgcc
aagatgtgccccgtgcccggcggcctgctcgaccccgccatgggccccgtcaacgccaac
gacacctgcaagacctgcgcgcagcagcccggcaactgcccgggccacttcggccacatc
gagctctccaagccgctcttcaacccgctgctcttcgacaccctccgggacctcctccgc
tccacctgcttcacctgccgcaagttccgcctcagcgcccagctggtcgacaggtacgcc
cgtgagcttgagctgctggcgaggggcgatgttgtccaggccaagaacttgcaagattcc
gctgtttcggaggaaagcgttgaaatggacgaggacggttcggttgataaaccggcgccc
ccttctgaccgagggaacaaaatctggacatccatccagttgaaagaggcccattctatc
ttctccaagctgatgaaaaagcgggtgaacaagtgtgcaaactgtggcatgaagaacccg
cccatcaaatgccagatatatggttggctcaccattcagggtacagatggttctgctgta
agaagaaaagcaatcaccgattataatcttgaaggagatggccatatttccaacccaaat
ggaactggtgtttctggtcttatggatgatagagttaaagcatcaagcaatcaaacaaaa
gacctttctgatgataggcctctcttggctacagaggttgaatctattctcaaagacctg
tgggaaaaggaagccaggttctgcatgttactatgcgactttcagcagaatttatgtgta
tcagaaaagaggaggggctatgagatgtttttcttgaagagtatgcttgtgccaccaaat
agattccgtccctcaactaactctagccttggaattatggaacatccacaaaatgttatg
ctaagtaaagtgcaagaggccaatcttgcgctacagcatgacaatcctaatcacatggat
attcttacaagatggagggatctgcaaacaagtgtaaatttattttacgatagtagtaaa
ggccttgtaaaaagcgataaagatggtcatggtgtacggcaattggtggataagaaaacc
gggattgttcgacagaaaataatgggcaaaagagttaatcattcctgccggacagttata
tctccggatccgtttttggctgttaacgaaattggcattcctcctgctgctgcttcaaag
ctgacttatcctgagaaagtgacgccctggaatgccaaaaatctgcgaggagctatacgt
aatggcgccgaaattcatcctggcgcgacacactacaaggttaacaataacctgtataaa
ttacaggctgaccattccaaacgtcatcccactgctaagacgttgcttgcttctagagga
tcaatttctcaaccagggaaggaccctagatgtgaatttgaaagcaaagttgtatatcga
catattcaagatggtgacattgtactggtcaacagacagcctactcttcacaagcccagc
atgatggcccatgttgttcgtgtgttgcctggagagaagacaattcgaatgcactatgcc
aattgcagtacatacaatgccgattttgatggggatgaaatgaatgtgcacttcccgcaa
gatgaaatatctcgggctgaggccatcaacattgttgatgcaaataagcagtacattggt
ccaaggagtggggaggctgtcagaggtctcattcaggaccacattgttggtgctgttctc
ctgacaaaagtggacacattcttgagccgtgaggaatacagtcagcttgtctatgggtct
tgtgtgtcctcaactcgtggtccttgtcaatctggtaaaagggtatccattgtgaatgat
gatgacacattggaacttcttcctccagcttttgtgaagccagagcggtggacgggaaaa
caggtcataacaaccatcttgaaccatttaacgaaaggccacccaccatttactgtggag
atgaaagggaaaatttcagtacaatatctaacagctaaagtacgccatgttgctgaagga
gaaaaacttagagatcctgaagaactagttttatatattcgccataatgagctcttaaag
ggcatgatagacaagaaccagttcgggaatcacgggataatacatacagttcatgaactc
tatggtgcagatacagctggaagattgctctcgattttcagccgcttgtttacattgttc
ttgcagtttcatggatttacttgtggaatagatgatctgttactatcccaagagtcaaat
aatgagaggacggattttttgtcgaaaagtgaggaacacagtgaagaagcccataagaaa
tttctgtgcaagaaagatgttgatacagatctagtggaattgcaaatgaacatcgaaaag
gttgttcggagaataggagaatctgcgaacgttgcgttggataaagcaatgttaagcgaa
ctaaatgggttaacaactaaggtcaataagaacatgtttccctatggtctacaaaagccc
tttcctaaaaattgtctcactcttatgactgcaactggagcaaaaggaggcgatgttaat
atgacacaaatctcgtcattgctaggctcacaagatttagaaggagcgcgtgttccacga
atgatatctgggaagtcattaccttgctttccaccatgggatagttcttcaagagctggt
ggttacgtcagtgacagatttttaactggtctccgtcctcaagagtactatttccattgt
atggctggcagaaatgggttgattgacacagcagtcaaaacatctcgtagtggatatctt
cagcgttgtcttatcaaaagtctcgaatcattgttcgtttcatatgatcactctgtgcgt
aatgttgatggatcaatcatacaattctgctatggagaagatggagttgatgtccataaa
agtagctttctcaaaaagtttaaagaactcgctgataatagaaaagctgtgtctgacagg
cttgcgaggtacaagggtgagcttgatatctacaatggcgatcccctgtcattcaagtcc
aaatacattactaaactgcctcaagtgctcaccaaaagcgcaacaaaatttcataaagaa
aacaagtgttgctgccgcaagcttaaaaagaagtgtcgctgccgttataacatcaaggag
gaggaactaatgaagttactgaaagtcaagtacgtggctagccttgtagatcctggtgaa
gctgttggtgtgatccttgctcaatccttaggagaaccttcaacgcagatgacactcaac
actttccatcttgctggaagaggggacatgaatgtcacacttgggatgcctcgcatacag
gaaatcctaatgaaagcatcagctaacattggcacgccttatatgaagtgccctgtgcat
gaaggcaagaagaggaaggatgctgcacgtctggccgaaaaactaaggggtgttacgttg
gctgatgttgtggaaggaattgaagtatgcacagttccttttcacaacagtaatgggcat
atttcgagtctctataagttgcatctaaaactattctcaccagactgttaccctcctgag
tcggaacttacagtagatgagtgtcaagcatccttgagaactgtgtttgttgatgcaatg
gaatatgcaatcgaaaaacacctaaatttgctacacaaagttagtggaatccaggaaaca
agggtaaaggacactgagaatttaccatcagaaggtcctgaagaatccgagggcagacct
accgacggtgacgagtctgatgcgagtgatggcgacgatgaaaatgaggatgacttggga
gctgatgcagaaaagaggaaacgacaagagaatgatgagatggagtatgaggatgatatt
gaaagtgaagatggcatgaacagtgaccctgatgaagagacaaaacatgaacttgataat
gaggatgatccagctgagtctggtgttgaatcagaagagaatgacgaaggacatttgtca
gattccagtaacaagactgcaaaattagaaggcgggctggcagctactaaactcaagaaa
aagagaaatgaaacggtggaaaacttgaaggagcagaagcaggcacatataacccagaaa
cgcagcaaaaagttaaagctgactgttcatgttgaaagcgcagatttgaattttgaggtt
cactacatcttgcacaaggaaccacatattttactatcccagattgcccagaagacattg
aggtccctatttgtcagtggatcccataacaaaaacataggtctatgtaatgttatttgg
ccagagaagaaaaagaaaggtgaaactgaaaccaagcaaaaagagacagagagggaagaa
gcctatcgagggctgcaaacggcaggactggactttgaggtattctgggatctgcaggac
ttcttgaacgtctgcaagcttacatctaacgacatacatgctatgttgaggacatacggg
gtggaggctgcgagggccaccatcattaacgaggtgaaggccgtatttgagccctttggc
atcaaggtagacccgaggcacctgagcctagcggctgattacatgacctcgggaggctcc
taccgaccgatgaacagcctcgggatggcccggttctgcacgtcgccgtttggcaagatg
agctttgagcaggccacgaggttcatcacggaggcggcctaccatggggaggtggacaac
ctcacgggcccttcggcgaccgtgtccctggggaaaccggccaagaccgggaccggtgcc
ttcgggctgatgcagaatatcaccctggaggagcgggcggtgatgtaa
DBGET
integrated database retrieval system
