Triticum dicoccoides (wild emmer wheat): 119287808
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Entry
119287808 CDS
T07278
Name
(RefSeq) pre-mRNA splicing factor SR-like 1 isoform X1
KO
K12850
pre-mRNA-splicing factor 38B
Organism
tdc
Triticum dicoccoides (wild emmer wheat)
Pathway
tdc03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
tdc00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
119287808
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
tdc03041
]
119287808
Spliceosome [BR:
tdc03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP related factors
119287808
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Paralog
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Motif
Pfam:
PRP38
PRP38_assoc
Bee_toxin
Motif
Other DBs
NCBI-GeneID:
119287808
NCBI-ProteinID:
XP_037423321
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Position
4A:661913613..661917464
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AA seq
399 aa
AA seq
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MELQTSGRPIEVLMEKVLSMNIVSSDYFKELYKIKTYHEVIDEIYNQVDHVEPWMTGNCR
GPSTAFCLLYKLFTMKLTVNQMHGLLKHPDSPYIRALFLQQIGFLYLRYAADPKTLWTWY
EPYIQDDEEFSPGSNGKMTTMGVYVRDVILGQYYFDSLLPRVPLLILRQVTAHLEKMKLP
TKQSGITGDSSRLGSDDTARRPPSVKASLSVSFGQRAPHRASTRDSSPVRKTLPSVRERE
RSHDGSHAKSPPRKHRSQSRERSRDIERDRSDRDRGRYKDREHGRHSRDNRDRDYRRSSY
SDRDVERRGHERRDRDSDRNGRSSGRRSRSRSRSPSRGRTNGDSHRSSPFGKAPESSNLA
KLKDLYGDATNAKDDAGDDRSRRDSGTEEVIRLGGARWR
NT seq
1200 nt
NT seq
+upstream
nt +downstream
nt
atggagctgcagacgtcggggcggcccatcgaggtgctgatggagaaggtgctgtcgatg
aacatcgtctcctcggactacttcaaggagctctacaagatcaagacctaccacgaggtc
atcgacgagatctacaaccaggtggaccacgtcgagccctggatgacgggcaactgccgc
ggcccctccaccgccttctgcctcctctacaagctcttcaccatgaagctcaccgtcaac
cagatgcacggcctgctcaagcacccggactccccctacatcagagctttatttttgcaa
cagattgggtttctgtacctgcgctatgccgcggacccaaagaccttatggacctggtat
gagccctacattcaagatgacgaggagttttcccctggatccaatggtaaaatgacaact
atgggcgtttatgtgcgtgatgtcatccttggtcagtactacttcgacagtcttcttcca
cgagtgcctctcctaattctgcgacaggttactgcccatctggagaaaatgaagctccca
acaaagcagtcagggataactggggattctagccgccttggttcagatgatactgcccgg
cggcctccttcagtgaaggcttctctgtccgtctcttttggtcagcgtgctccacaccgt
gcatccacaagggattcatccccagtccgaaagacattgccttctgtacgagaaagggaa
aggagtcatgatggcagtcatgccaaatctccacccaggaagcaccgaagtcagagtcgt
gagcgcagccgtgacattgagagggaccgttcagatcgcgatcgtggtaggtacaaggat
agggagcatggtcggcacagccgtgataacagagaccgtgactaccgccgctcaagctat
tctgatagggatgttgagaggcgcggccatgaaaggagggatagggactccgaccgaaac
gggcgttcgagtggccgcagaagcaggagcaggagcaggagtccaagccgtggcagaacc
aacggggacagccaccgctccagcccgtttggtaaagcgccggagtcatcaaacctggcg
aagctgaaggatctatacggtgacgcgacgaacgcgaaggacgacgccggcgacgacaga
tctcgcagggactccggaactgaagaggtgatcagattgggaggcgccaggtggaggtga
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