Triticum dicoccoides (wild emmer wheat): 119288672
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Entry
119288672 CDS
T07278
Name
(RefSeq) polygalacturonase-like
KO
K01184
polygalacturonase [EC:
3.2.1.15
]
Organism
tdc
Triticum dicoccoides (wild emmer wheat)
Pathway
tdc00040
Pentose and glucuronate interconversions
tdc01100
Metabolic pathways
Module
tdc_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
tdc00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
119288672
Enzymes [BR:
tdc01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.15 endo-polygalacturonase
119288672
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Motif
Pfam:
Glyco_hydro_28
Beta_helix
Motif
Other DBs
NCBI-GeneID:
119288672
NCBI-ProteinID:
XP_037424142
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Position
4A:57618487..57621053
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AA seq
433 aa
AA seq
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MGPRKFLLASITTVSVLLYMFPHASSESVALPPESAYGPAAESPDAGARDLSPVPPPMVF
DVDDYGASAGGDATEAFLAAWKDACNSSSDPSLLLVPEGKAYLLMPVSFTGPCRATTITA
MIRGTLEAPSNRSVWLDGDRRERWITFEDVDSLHVMGGGTLNGHGQEWWINSCKVNKSMK
CVAGPTALYFRSCDHLVVDDLEVKDSMQMHVVIANCWKAAVSRLFVTAPGWSPNTDGIHV
SNSREVSITNCIISTGDDCISIVSGSEFVWASGIYCGPGHGISIGSLGANKSRAHVSDVL
VEKATLVGTTNGVRIKTWQGGEGSAERIIFQDIKMYNVTNPIIIDQNYCDSKKPCSEEES
AVAISDIRYNNIHGTSSSKVAVKFICSSAVHCDGIVMQDVSLVGQKGAYLKCSSVNARVI
TPGFNYPYCTADM
NT seq
1302 nt
NT seq
+upstream
nt +downstream
nt
atgggtcccaggaagtttctcttggcctccattactaccgtatcagttcttctttacatg
tttccgcacgccagttcggagtccgtagccctccctcccgaatcggcctatggcccggcc
gcagagagtccggacgccggtgcgcgggatctcagcccagtgccgccgccgatggtattc
gacgtcgacgactacggcgcctcggccggcggcgacgccaccgaggcgtttctcgcggcg
tggaaggacgcctgcaactcctcctccgacccgtccctgctcctcgtgcccgaggggaag
gcctacctcctcatgcccgtcagcttcaccggcccctgcagggctaccacgatcacggca
atgatcaggggaacgctggaggcgccgtcgaaccggtcggtgtggctggacggcgaccgc
cgggagcggtggatcacgttcgaggacgtcgacagcctgcacgtcatgggcggcgggacg
ctcaacgggcacgggcaggagtggtggatcaactcgtgcaaggtcaacaaatccatgaaa
tgcgtcgccggcccgacggccctgtacttcaggagctgcgaccatctggtggtggacgac
ctggaggtaaaggacagcatgcagatgcacgtcgtgatcgccaactgctggaaagccgcc
gtctcgcggctgttcgtcaccgcgccggggtggagccccaacaccgacgggatccacgta
tccaacagcagagaggtgtccataaccaactgcatcatcagcacaggtgatgactgcata
tccattgtgtctggctctgagtttgtgtgggcatcaggcatatattgtgggccgggccat
ggaataagcattggcagcctaggagcgaacaaatcgcgggcccatgtctctgacgtgctg
gtggagaaggccacgctggtgggcacaaccaacggtgtgcggatcaaaacatggcaggga
ggagaagggtctgcagagaggattattttccaagacataaagatgtacaatgtcactaac
cctatcatcattgaccagaactactgtgactccaagaaaccatgctccgaagaggaatca
gctgttgccataagtgacatacgctacaacaacatacacggaaccagttcatcgaaagtc
gcggtgaaattcatttgcagcagcgctgtccattgcgatggcatagtgatgcaagatgtt
tctttggtcgggcaaaaaggggcctaccttaaatgttcctccgtgaacgccagagttata
acaccaggattcaactacccttattgcaccgcggacatgtag
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