Triticum dicoccoides (wild emmer wheat): 119288959
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Entry
119288959 CDS
T07278
Name
(RefSeq) chaperonin CPN60-like 2, mitochondrial
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
tdc
Triticum dicoccoides (wild emmer wheat)
Pathway
tdc03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
tdc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
119288959
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tdc03019
]
119288959
03110 Chaperones and folding catalysts [BR:
tdc03110
]
119288959
03029 Mitochondrial biogenesis [BR:
tdc03029
]
119288959
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
tdc04147
]
119288959
Enzymes [BR:
tdc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
119288959
Messenger RNA biogenesis [BR:
tdc03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
119288959
Chaperones and folding catalysts [BR:
tdc03110
]
Heat shock proteins
HSP60 / Chaperonin
119288959
Mitochondrial biogenesis [BR:
tdc03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
119288959
Exosome [BR:
tdc04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
119288959
Exosomal proteins of other body fluids (saliva and urine)
119288959
Exosomal proteins of breast cancer cells
119288959
Exosomal proteins of colorectal cancer cells
119288959
Exosomal proteins of bladder cancer cells
119288959
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
cwf21
Nbl1_Borealin_N
DUF5570
Motif
Other DBs
NCBI-GeneID:
119288959
NCBI-ProteinID:
XP_037424319
LinkDB
All DBs
Position
1A:complement(553881552..553886594)
Genome browser
AA seq
579 aa
AA seq
DB search
MYRAAAAAISRSSSSALRRQLARGGGGEQRQWARGYAAKEVTFGVGARAAMLRGVNDLAD
AVKVTMGPKGRNVVIERPNRSPKVTKDGVTVAKSIEFEDSAKNVGASLVKQVADATNKAA
GDGTTCATVLTQAILTEGCKAVAAGVNVMDLRKGINKAISAVTAHLKSKAWMIDSPDEIN
QVATISANGEKEIGDLISKAMGIVGKDGVITIADGKTLDNELEAVQGMKLTRGYISPYFV
TDHKTQKCELKDPLILIHDKKISNMNSLLPAVQISIQNRRPLLIFAEDVDGEALSMLVLN
KHRAGLKICAVKAPGFGENRRANLDDMAVLTGGQVISEDQGLDLDKVELQMLGTAKKVTV
SLDDTIILDGGGERQQIEERCQQLRESLENSTSMFDKEKAQERLSKLSGGVAILKIGGAS
EAEVGEKKDRVTDALNAARAAVEEGIVPGGGVALLYATKELDNISTSHEDEKIGVQIIKN
ALKAPLMTIAANAGIDGAIVIGKLLEQDNLSLGYDAAKGEYVDMIKAGIIDPVKVIRTAL
QDAASVSLLMTTTEAAVAELPSTKARIASRMPDMSGMGF
NT seq
1740 nt
NT seq
+upstream
nt +downstream
nt
atgtaccgggcggcggccgcggccatttcgcggtcctcctcctcggcgctgcggcggcag
ctcgcgcgcggcggcggcggggagcagcggcagtgggcgcgcgggtacgcggcgaaggag
gtcaccttcggcgtcggcgcgcgcgccgccatgctgcggggcgtcaacgacctcgcggac
gccgtcaaggtcaccatgggccccaagggccgcaatgtggttatcgagagaccgaacaga
tcccccaaggtcaccaaggacggggtcaccgttgccaagagcatagagttcgaggacagc
gccaagaatgttggggcgagcctggtgaagcaggtcgccgatgccactaacaaggcagca
ggagatggtaccacttgtgcaactgtgcttacacaggcaattctcacggaaggatgcaag
gctgtggcagcaggggtcaatgttatggatttgcggaaaggcataaacaaggctataagc
gccgtcactgctcacctcaaaagtaaagcatggatgattgattccccagatgaaataaac
caggtagctacaatttctgcaaatggcgaaaaggaaattggagatctgatatcaaaagct
atgggaatagttggaaaggatggcgtcattactattgctgatggcaaaacattggataat
gagcttgaagcagtccagggaatgaagttgactagaggctacatatccccttactttgta
actgatcacaagactcagaaatgtgagttgaaagatcctctgattcttattcatgacaag
aaaatctcaaacatgaattcacttcttccagcagtgcaaatttctatccagaaccgcaga
cctcttctcatttttgctgaggatgtagatggagaagctctatcaatgcttgtactgaac
aagcatcgtgctggactcaagatatgtgctgtcaaagctcctggatttggtgaaaacaga
agggccaatctggatgatatggctgttttaacaggagggcaggttattagcgaggatcaa
ggtcttgatcttgataaagttgaactacaaatgctcggcacagctaagaaggttactgta
tctcttgatgacactatcattctagatggtggaggtgaaaggcaacagatagaagagagg
tgtcaacagcttagagaatcacttgagaacagcacctccatgttcgacaaagaaaaggct
caagagcgtttatcaaaattatctggaggcgttgctattcttaagattggtggagctagt
gaagctgaagttggtgagaaaaaagacagggtaacagatgctctaaatgctgcaagggct
gctgtggaggagggtattgttccaggtggtggagttgcacttttatatgccaccaaggag
cttgacaatattagcacatcgcatgaggatgaaaagattggagttcagattatcaagaat
gctttgaaggcccctctgatgaccatagctgcaaatgccggcatcgatggtgccatagtt
attgggaagctactggaacaagataatcttagtctgggctatgacgcagcaaaaggggag
tatgttgacatgatcaaggctggtatcatcgaccccgtgaaggtgattcgaactgcactt
caagatgcagcaagcgtttctctgctgatgacaaccacagaggctgcagtcgctgagctc
ccgtcgacaaaagccagaattgccagtcgcatgccggacatgagcggaatgggcttctga
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