Triticum dicoccoides (wild emmer wheat): 119288976
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Entry
119288976 CDS
T07278
Name
(RefSeq) probable rhamnogalacturonate lyase C
KO
K18195
rhamnogalacturonan endolyase [EC:
4.2.2.23
]
Organism
tdc
Triticum dicoccoides (wild emmer wheat)
Brite
KEGG Orthology (KO) [BR:
tdc00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
119288976
Enzymes [BR:
tdc01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.23 rhamnogalacturonan endolyase
119288976
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Motif
Pfam:
Rhamnogal_lyase
CBM-like
fn3_3
RhgB_N
Motif
Other DBs
NCBI-GeneID:
119288976
NCBI-ProteinID:
XP_037424330
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Position
4A:complement(465216993..465221203)
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AA seq
677 aa
AA seq
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MAAVLILLLAAVVGVAATVAPAPVARGAGVMLHVEHHQVVVDNGVVQVTVSKPQGQITGV
RYAGEHNLLHFTNDENSGGYWDVVWNFPGSGHPRGMIDMLDSTEFRVVSASEDQVELSFR
STYDPSRLNSVRLTVDKRLVMLRGSSGFYCYAILEHAGSWPALNITEARLAFKLNTARFT
YMAVSDEIQRYMPRPADRDAPRGMPLAYKEAVLLLNPAEPQFKGEVDDKYQYSLDNKDNA
VHGWIAGAPGSAVGFWVVTPSNEFKTGGPLKRELTSHVGPTSLTMFMGTHYVGNDIVAKI
KEGEHWKKVMGPVFIYLNSKPERRDFHALWEDAKAQAEAEASKWPYTFPESPDFHKASQR
GSVTGRLLVRDRFVSGKDMPARRAYVGLAAPGQPGSWATESKGYQFWARASATCGSFAIG
NVRAGVYNLYAWVPGILGDYMHTSTMTVDAGGAVALGDLVFEPPRSGPTLWEIGVPDRSA
AEFFVPEPNPKYVNKLFLSKDKYRQYGLWDRYAELYPGGDPVFTVGESHYSKDWFFAHVT
RKTSNGSDAVTTRRIRFGLSRVVADGTYTLRVALAAAHMSRLQLRVNGAPVTRRGSSADA
GVFVTPDFGDGNAIARHGDHGTWWSFEFGIKGYLLMEGENTISITQVRAFSEFMGVMYDY
IRLEGPPGSWRDPTQLP
NT seq
2034 nt
NT seq
+upstream
nt +downstream
nt
atggcagcggttctgatcctcctgctcgccgcggtggtgggcgtggctgcgacggtggcg
ccggcgccggtggcacgcggcgctggcgttatgctgcatgtagagcatcaccaggttgtg
gtggacaacggcgtggtgcaggtaacggtgtccaagccgcagggccagatcaccggcgta
cgctacgccggcgagcacaacctcctgcacttcactaacgacgaaaactctggcgggtac
tgggacgtggtttggaactttccagggtccggtcatccaagaggcatgatcgacatgctg
gacagcacagagttcagggtcgtatcggccagcgaagatcaggtggagctatccttcagg
agcacctacgacccatcacgcctcaacagcgtccggctcaccgtcgacaagaggctggtg
atgctgagaggcagctccgggttctactgctacgccatcttggagcacgcgggcagctgg
ccggccctcaacatcacggaggcgcggctcgccttcaagctcaacacggcaaggttcacc
tacatggcggtctcggacgagatccagaggtacatgcccaggccggcggaccgggacgcg
ccccgcggcatgcccctggcgtacaaggaggccgtgctcctcctcaaccccgccgagccg
cagttcaagggcgaggtggacgacaagtaccagtactcgctcgacaacaaggacaacgcg
gttcatggctggatcgccggcgctcccggctcggccgtggggttctgggtcgtcaccccc
agcaacgagttcaagaccggcggcccgctcaagcgcgagctcacctcccacgtcggcccc
acctccctcaccatgtttatgggaacacattacgtcgggaatgacatcgtggccaagatc
aaggagggcgaacactggaagaaggtcatgggcccggtgttcatctacctcaactccaag
cccgagaggcgggacttccacgcgctctgggaggacgccaaggcgcaggccgaggccgag
gccagcaaatggccctacaccttcccggagtcgcctgatttccacaaggctagccagcgg
ggctcggtcaccggccgattgctggtcagggacaggttcgtgagcggcaaggacatgccc
gcccgccgtgcctacgtcggcctcgccgcgccggggcagcctggctcctgggccacagag
agcaagggctaccagttctgggcgagggcgtcggcgacctgcggcagcttcgccatcggc
aacgtccgggcaggggtgtacaacctctacgcctgggtcccggggatcctcggcgactat
atgcacacgtctaccatgacggtagatgccggcggcgccgttgccctcggtgacctcgtg
ttcgagccgccgcggtcggggccgacgctgtgggagatcggcgtgcctgaccggagcgcc
gccgagttcttcgttcctgagcccaaccccaagtacgtcaacaagctcttcctcagcaag
gacaagtacaggcagtacgggctgtgggacaggtacgctgagctgtaccccggcggcgac
cccgtcttcaccgtcggcgagagccactactccaaggactggttcttcgcgcacgtcacg
aggaagacgagcaacggttccgacgcggtgacgacgcgacggatccggttcggcctgtcc
cgcgtcgtcgccgacggcacctacacgctgcgtgtggccctcgcggcggcccacatgtcg
aggctgcagctgcgggtgaacggggcgccggtgacgaggagggggtcgtcggcggacgcc
ggagtgttcgtgacgccggacttcggcgacggcaacgcgatcgcgaggcacggcgatcac
ggcacgtggtggagcttcgagttcgggatcaaggggtacctgctcatggaaggggagaac
accatcagcatcacgcaggtcagggccttcagcgagttcatgggggtcatgtacgactac
atccggctggaagggccgcccggttcttggcgagatcccacacaacttccgtga
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